Ss1.1-Pig2-74A04.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
GTGCCGGGTGGACGCCGGGTGGTGGGCCGAGACCCTGCGACCCTACCGGAGCCCGCTGCT AGAGAGGGAGCAGAGGGAGGACCAGGAGTTTCAGGCAAAGCACCTGGACCAGCCTATGCC CACTGTCATCGGCACATACAAGAACCACCCGCTGTATGCCCTGAAGAGGCACCTCCTAAA GTATGAGGCCATCTACCCCGAGACGGCTGCCATCCTCGGCTACTGCCGTGGGGAAGCCGT GTACTCCAGGGATTGTGTGCATACCCTGCACTCCAGGGACACGTGGCTGAAACAAGGGAG AGTGGTGAGGCTGGGAGAAGTGCCCTACAAGATGGTAAAAGGCTATTCTAACCGGGCCCG GAAGGCCCGCCTGGCCGAGCCGCAGCTGCGGGACCACAACGACCTGCCCCTGTTTGGCCA GTGGCAGACCGAGGAGTACCAGCCGCCTGTGGCTGTGGACGGGAAGGTCCCCCGGAATGA GTTTGGGAACGTGTACCTCTTCCTGCCCAGCATGATGCCTGTGGGCTGCGTTCAGCTGAA TCTGCCCAACCTGCAGCGTGTGGCCCGGAAGCTGAACATCGACTGTGTCCAGGCCATCAC TGGCTTTGACTTCCACAAAGGCTACTCTCATCCCATAACTGATGGCTACATAGTGTGTGA GGAGTACAGAGACATTCTCCTGGCCGCCTGGGAGAACGAGCAGGCGCTCATCGAGAAGAA GGAGAAGGAGAA |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
GTGCCGGGTGGACGCCGGGTGGTGGGCCGAGACCCTGCGACCCTACCGGAGCCCGCTGCT AGAGAGGGAGCAGAGGGAGGACCAGGAGTTTCAGGCAAAGCACCTGGACCAGCCTATGCC CACTGTCATCGGCACATACAAGAACCACCCGCTGTATGCCCTGAAGAGGCACCTCCTAAA GTATGAGGCCATCTACCCCGAGACGGCTGCCATCCTCGGCTACTGCCGTGGGGAAGCCGT GTACTCCAGGGATTGTGTGCATACCCTGCACTCCAGGGACACGTGGCTGAAACAAGGGAG AGTGGTGAGGCTGGGAGAAGTGCCCTACAAGATGGTAAAAGGCTATTCTAACCGGGCCCG GAAGGCCCGCCTGGCCGAGCCGCAGCTGCGGGACCACAACGACCTGCCCCTGTTTGGCCA GTGGCAGACCGAGGAGTACCAGCCGCCTGTGGCTGTGGACGGGAAGGTCCCCCGGAATGA GTTTGGGAACGTGTACCTCTTCCTGCCCAGCATGATGCCTGTGGGCTGCGTTCAGCTGAA TCTGCCCAACCTGCAGCGTGTGGCCCGGAAGCTGAACATCGACTGTGTCCAGGCCATCAC TGGCTTTGACTTCCACAAAGGCTACTCTCATCCCATAACTGATGGCTACATAGTGTGTGA GGAGTACAGAGACATTCTCCTGGCCGCCTGGGAGAACGAGCAGGCGCTCATCGAGAAGAA GGAGAAGGAGAA |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 36 entry(ies) | More info |
Aligned organism(s): 36 entry(ies) | Help | Less info |
87-250, gnl|bosTau2|chr22 (45916554-45916391) | |
87-250, gnl|canFam2|chr20 (7311225-7311454) | |
87-250, gnl|danRer3|chrNA (135908680-135908499) | |
87-250, gnl|dasNov1|scaffold_8862 (37560-37792) | |
87-250, gnl|echTel1|scaffold_310029 (90168-90396) | |
87-250, gnl|fr1|chrUn (220704141-220704371) | |
87-250, gnl|galGal2|chr12 (10815274-10815471) | |
87-250, gnl|hg17|chr3 (14172825-14173058) | |
87-250, gnl|Hg17|chr3 (14172999-14172835) | |
87-250, gnl|loxAfr1|scaffold_26929 (13823-13593) | |
87-250, gnl|mm7|chr6 (91580522-91580749) | |
87-250, gnl|Mm7|chr6 (91580695-91580532) | |
87-250, gnl|monDom2|scaffold_5 (43360988-43360767) | |
87-250, gnl|oryCun1|scaffold_190797 (15890-16098) | |
87-250, gnl|panTro1|chr2 (14770429-14770661) | |
87-250, gnl|rheMac2|chr11 (83844123-83844355) | |
87-250, gnl|rn3|chr4 (125926211-125926438) | |
87-250, gnl|tetNig1|chr9 (643286-643079) | |
465-636, gnl|bosTau2|chr22 (45914165-45913994) | |
465-636, gnl|canFam2|chr20 (7306912-7307091) | |
465-636, gnl|danRer3|chrNA (135910473-135910289) | |
465-636, gnl|dasNov1|scaffold_8862 (31403-31582) | |
465-636, gnl|echTel1|scaffold_310029 (82709-82888) | |
465-636, gnl|fr1|chrUn (220703183-220703362) | |
465-636, gnl|galGal2|chr12 (10813741-10813920) | |
465-636, gnl|hg17|chr3 (14165058-14165237) | |
465-636, gnl|Hg17|chr3 (14165234-14165063) | |
465-636, gnl|loxAfr1|scaffold_21379 (42807-42628) | |
465-636, gnl|mm7|chr6 (91575340-91575519) | |
465-636, gnl|Mm7|chr6 (91575516-91575345) | |
465-636, gnl|monDom2|scaffold_5 (43365706-43365528) | |
465-636, gnl|panTro1|chr2 (14762732-14762911) | |
465-636, gnl|rheMac2|chr11 (83836650-83836829) | |
465-636, gnl|rn3|chr4 (125920476-125920655) | |
465-636, gnl|tetNig1|chr9 (644439-644265) | |
465-636, gnl|xenTro1|scaffold_368 (882978-882803) |
Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
87-250, gnl|bosTau2|chr22 (45916554-45916391) | |
87-250, gnl|canFam2|chr20 (7311225-7311454) | |
87-250, gnl|danRer3|chrNA (135908680-135908499) | |
87-250, gnl|dasNov1|scaffold_8862 (37560-37792) | |
87-250, gnl|echTel1|scaffold_310029 (90168-90396) | |
87-250, gnl|fr1|chrUn (220704141-220704371) | |
87-250, gnl|galGal2|chr12 (10815274-10815471) | |
87-250, gnl|hg17|chr3 (14172825-14173058) | |
87-250, gnl|Hg17|chr3 (14172999-14172835) | |
87-250, gnl|loxAfr1|scaffold_26929 (13823-13593) | |
87-250, gnl|mm7|chr6 (91580522-91580749) | |
87-250, gnl|Mm7|chr6 (91580695-91580532) | |
87-250, gnl|monDom2|scaffold_5 (43360988-43360767) | |
87-250, gnl|oryCun1|scaffold_190797 (15890-16098) | |
87-250, gnl|panTro1|chr2 (14770429-14770661) | |
87-250, gnl|rheMac2|chr11 (83844123-83844355) | |
87-250, gnl|rn3|chr4 (125926211-125926438) | |
87-250, gnl|tetNig1|chr9 (643286-643079) | |
465-636, gnl|bosTau2|chr22 (45914165-45913994) | |
465-636, gnl|canFam2|chr20 (7306912-7307091) | |
465-636, gnl|danRer3|chrNA (135910473-135910289) | |
465-636, gnl|dasNov1|scaffold_8862 (31403-31582) | |
465-636, gnl|echTel1|scaffold_310029 (82709-82888) | |
465-636, gnl|fr1|chrUn (220703183-220703362) | |
465-636, gnl|galGal2|chr12 (10813741-10813920) | |
465-636, gnl|hg17|chr3 (14165058-14165237) | |
465-636, gnl|Hg17|chr3 (14165234-14165063) | |
465-636, gnl|loxAfr1|scaffold_21379 (42807-42628) | |
465-636, gnl|mm7|chr6 (91575340-91575519) | |
465-636, gnl|Mm7|chr6 (91575516-91575345) | |
465-636, gnl|monDom2|scaffold_5 (43365706-43365528) | |
465-636, gnl|panTro1|chr2 (14762732-14762911) | |
465-636, gnl|rheMac2|chr11 (83836650-83836829) | |
465-636, gnl|rn3|chr4 (125920476-125920655) | |
465-636, gnl|tetNig1|chr9 (644439-644265) | |
465-636, gnl|xenTro1|scaffold_368 (882978-882803) |
Expressed library(ies): 3 entry(ies) | More info |
Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
eli (0.151814) | |
cst (0.140036) | |
cly (0.120642) |