Ss1.1-Pig2-74A07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCAAGGACTGGGTCCAGCGGCGCCGGGAGGCCCTGCAGAGGGGGGAGGACGTCCCCGCC GACATCCTCACTCAGATTCTCAAAGCTGAAGAAGGGGCCCAGGACGACGAGATCCTGCTG GACAACTTCGTCACCTTCTTCATCGCGGGTCACGAGACCTCTGCCAATCACCTGGCCTTC ACGGTGATGGAGCTGTCACGCCAGCCGGAGATCTTGGCGAGGCTGCAGGCCGAGGTGGAC GAGGTCATCGGCTCCAAGAGGCACCTTGACTGCGAGGACCTGGGGAGACTGCAGTACCTG TCCCAGGTCCTCAAAGAGTCGCTGAGGCTGTACCCGCCAGCGTGGGGCACCTTCCGTCTG CTGGAGGAGGAGACTTTGATCGACGGCGTCCGCGTCCCTGGCAACACCCCGCTCCTGTTC AGCACCTACGTCATGGGGCGGATGGACACGTACTTTGAGGACCCGCTGACTTTCAACCCG GATCGCTTCAGTCCCAAAGCACCCAAGCCCAAGTTTACCTACTTCCCCTTCTCCCTGGGG CCCCGCTCCTGCATCGGGCAGCAGTTTGCTCAGATGGAGGTGAAGGTGGTCATGGCCAAG CTGCTGCAGAGGCTCGAGTTCCGGCTGGTGCCCGGGCAGAGTTTCGGGCTGCAGGAGCAG GTCACGCTCAAGCCGCTGGACCCCGTGCTGTGTACCCTGCAGCCCCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCAAGGACTGGGTCCAGCGGCGCCGGGAGGCCCTGCAGAGGGGGGAGGACGTCCCCGCC GACATCCTCACTCAGATTCTCAAAGCTGAAGAAGGGGCCCAGGACGACGAGATCCTGCTG GACAACTTCGTCACCTTCTTCATCGCGGGTCACGAGACCTCTGCCAATCACCTGGCCTTC ACGGTGATGGAGCTGTCACGCCAGCCGGAGATCTTGGCGAGGCTGCAGGCCGAGGTGGAC GAGGTCATCGGCTCCAAGAGGCACCTTGACTGCGAGGACCTGGGGAGACTGCAGTACCTG TCCCAGGTCCTCAAAGAGTCGCTGAGGCTGTACCCGCCAGCGTGGGGCACCTTCCGTCTG CTGGAGGAGGAGACTTTGATCGACGGCGTCCGCGTCCCTGGCAACACCCCGCTCCTGTTC AGCACCTACGTCATGGGGCGGATGGACACGTACTTTGAGGACCCGCTGACTTTCAACCCG GATCGCTTCAGTCCCAAAGCACCCAAGCCCAAGTTTACCTACTTCCCCTTCTCCCTGGGG CCCCGCTCCTGCATCGGGCAGCAGTTTGCTCAGATGGAGGTGAAGGTGGTCATGGCCAAG CTGCTGCAGAGGCTCGAGTTCCGGCTGGTGCCCGGGCAGAGTTTCGGGCTGCAGGAGCAG GTCACGCTCAAGCCGCTGGACCCCGTGCTGTGTACCCTGCAGCCCCGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 304-417, gnl|bosTau2|chr21 (42635959-42636072) | |
| 304-417, gnl|canFam2|chr8 (71128495-71128694) | |
| 304-417, gnl|dasNov1|scaffold_88406 (5379-5561) | |
| 304-417, gnl|echTel1|scaffold_239660 (886-1085) | |
| 304-417, gnl|hg17|chr14 (99257946-99258152) | |
| 304-417, gnl|Hg17|chr14 (99258043-99258156) | |
| 304-417, gnl|loxAfr1|scaffold_92451 (877-679) | |
| 304-417, gnl|mm7|chr12 (105879120-105879312) | |
| 304-417, gnl|Mm7|chr12 (105879203-105879316) | |
| 304-417, gnl|oryCun1|scaffold_76129 (683-513) | |
| 304-417, gnl|panTro1|chr15 (99757545-99757751) | |
| 304-417, gnl|rheMac2|chr7 (162983212-162983418) | |
| 304-417, gnl|rn3|chr6 (132734364-132734558) | |
| 567-708, gnl|bosTau2|chr21 (42639283-42639424) | |
| 567-708, gnl|canFam2|chr8 (71133023-71133145) | |
| 567-708, gnl|echTel1|scaffold_239660 (4001-4120) | |
| 567-708, gnl|hg17|chr1 (48267157-48267279) | |
| 567-708, gnl|Hg17|chr14 (99262640-99262781) | |
| 567-708, gnl|loxAfr1|scaffold_177539 (1113-993) | |
| 567-708, gnl|mm7|chr12 (105882688-105882809) | |
| 567-708, gnl|Mm7|chr12 (105882665-105882823) | |
| 567-708, gnl|panTro1|chr1 (46476694-46476816) | |
| 567-708, gnl|rheMac2|chr1 (50904809-50904931) | |
| 567-708, gnl|rn3|chr6 (132737449-132737570) | |
| 567-708, gnl|tetNig1|chr14 (8172942-8172819) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 304-417, gnl|bosTau2|chr21 (42635959-42636072) | |
| 304-417, gnl|canFam2|chr8 (71128495-71128694) | |
| 304-417, gnl|dasNov1|scaffold_88406 (5379-5561) | |
| 304-417, gnl|echTel1|scaffold_239660 (886-1085) | |
| 304-417, gnl|hg17|chr14 (99257946-99258152) | |
| 304-417, gnl|Hg17|chr14 (99258043-99258156) | |
| 304-417, gnl|loxAfr1|scaffold_92451 (877-679) | |
| 304-417, gnl|mm7|chr12 (105879120-105879312) | |
| 304-417, gnl|Mm7|chr12 (105879203-105879316) | |
| 304-417, gnl|oryCun1|scaffold_76129 (683-513) | |
| 304-417, gnl|panTro1|chr15 (99757545-99757751) | |
| 304-417, gnl|rheMac2|chr7 (162983212-162983418) | |
| 304-417, gnl|rn3|chr6 (132734364-132734558) | |
| 567-708, gnl|bosTau2|chr21 (42639283-42639424) | |
| 567-708, gnl|canFam2|chr8 (71133023-71133145) | |
| 567-708, gnl|echTel1|scaffold_239660 (4001-4120) | |
| 567-708, gnl|hg17|chr1 (48267157-48267279) | |
| 567-708, gnl|Hg17|chr14 (99262640-99262781) | |
| 567-708, gnl|loxAfr1|scaffold_177539 (1113-993) | |
| 567-708, gnl|mm7|chr12 (105882688-105882809) | |
| 567-708, gnl|Mm7|chr12 (105882665-105882823) | |
| 567-708, gnl|panTro1|chr1 (46476694-46476816) | |
| 567-708, gnl|rheMac2|chr1 (50904809-50904931) | |
| 567-708, gnl|rn3|chr6 (132737449-132737570) | |
| 567-708, gnl|tetNig1|chr14 (8172942-8172819) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) |