Non-Coding RNA Search

Ss1.1-Pig2-74C09.5

Sequence:


               
               AAAAAACATAGATGGTCCCAAAATGCAGACAAAGATGAGTACCTGGACACCCTTAAACCA
TCAGCTCTTGAATGACCAGATATTTGAAGAAAGAAGAGCACTGCTTGGAAAATGGTTTGA
CAAATGGACAGACTCTCAAAGGAGAAGAATCCTGACAGGCCTGTTAGAACGCTGTTCTCT
TTCACAGCAAAAGTTCTGCTGTCGAAAGCTTCAGGAAAAAATTCCAGCAGAAGCTCTGGA
TTTTACTACCAAGCTTCCAAGAGTGTTATCTTTATATATCTTCTCTTTCCTGGACCCTCG
AAGCCTTTGTCGTTGTGCACAGGTGAGCTGGCATTGGAAGAACTTAACAGAACTGGATCA
GCTCTGGATGCTCAAATGTTTACGGTTTAACTGGTACATCAATTTCTCTCCAACTCCCTT
TGAGCAGGGTATATGGAAGAAGCACTACATTCAAATGGTGAAAGAACTCCACGTTACCAA
GCCCAAGACACCTCCAAAAGATGGGTTTGTGATCGCCAATGTTCAACCAGTTACAAGCAG
TTCTCCAGAGGAAAAGCCATCTCCTTCCTCAGCTTTCCGGTCCTCTGCCTCTTTAAGAAA
GAAGAACCACCCAGGGGAGAAAGAACTCCCACCCTGGCGATCCTCTGACAAGCATCCGAC
TGACATCATTCGCTTCAATTACCTGGACAACTGTGACCCCATTGAGCACAGCTGGCGAGG
AAGAAGGAAAAGATCTGAAAAAAACCCAGACTTCAACCGACAGTCACATGACAAGAAAAA
TAAATTGCAGGACAGAGCTAAACTGAGAAAAGCACAGTCATTGATGTCCAGGAGAAACCC
TTTCTCACTATATCCCTAAGAGCAGGACCCAGCTCCTCGATACACATTCCAGCTCATCTT
GCCTGGCCTCCTCATCAGGTAGGGGGGCTTCCAGCCACCGAAGCAGCAACAAAAATGCTC
ATGCAGCATATCCAGAGACACTCTGGCTTCAATCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAACATAGATGGTCCCAAAATGCAGACAAAGATGAGTACCTGGACACCCTTAAACCA
TCAGCTCTTGAATGACCAGATATTTGAAGAAAGAAGAGCACTGCTTGGAAAATGGTTTGA
CAAATGGACAGACTCTCAAAGGAGAAGAATCCTGACAGGCCTGTTAGAACGCTGTTCTCT
TTCACAGCAAAAGTTCTGCTGTCGAAAGCTTCAGGAAAAAATTCCAGCAGAAGCTCTGGA
TTTTACTACCAAGCTTCCAAGAGTGTTATCTTTATATATCTTCTCTTTCCTGGACCCTCG
AAGCCTTTGTCGTTGTGCACAGGTGAGCTGGCATTGGAAGAACTTAACAGAACTGGATCA
GCTCTGGATGCTCAAATGTTTACGGTTTAACTGGTACATCAATTTCTCTCCAACTCCCTT
TGAGCAGGGTATATGGAAGAAGCACTACATTCAAATGGTGAAAGAACTCCACGTTACCAA
GCCCAAGACACCTCCAAAAGATGGGTTTGTGATCGCCAATGTTCAACCAGTTACAAGCAG
TTCTCCAGAGGAAAAGCCATCTCCTTCCTCAGCTTTCCGGTCCTCTGCCTCTTTAAGAAA
GAAGAACCACCCAGGGGAGAAAGAACTCCCACCCTGGCGATCCTCTGACAAGCATCCGAC
TGACATCATTCGCTTCAATTACCTGGACAACTGTGACCCCATTGAGCACAGCTGGCGAGG
AAGAAGGAAAAGATCTGAAAAAAACCCAGACTTCAACCGACAGTCACATGACAAGAAAAA
TAAATTGCAGGACAGAGCTAAACTGAGAAAAGCACAGTCATTGATGTCCAGGAGAAACCC
TTTCTCACTATATCCCTAAGAGCAGGACCCAGCTCCTCGATACACATTCCAGCTCATCTT
GCCTGGCCTCCTCATCAGGTAGGGGGGCTTCCAGCCACCGAAGCAGCAACAAAAATGCTC
ATGCAGCATATCCAGAGACACTCTGGCTTCAATCAT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               FBX16_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               FBX16_HUMAN

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-115, gnl|bosTau2|chr1 (31959746-31959859)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-115, gnl|bosTau2|chr1 (31959746-31959859)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)