Non-Coding RNA Search

Ss1.1-Pig2-74C14.5

Sequence:


               
               TTGTCGTGGAGGGGGGCCCCATGAGTACGGCGCCCCTGGTGGGCTACAGCAGCAGTGGCT
CCGAGGATGAGGCCGAGGCCGAGGCCAAGGCCGGGACCCGGGCCCAGCCGGGGGCTAGAG
GCCGCAGTCGGGGCCAGAGCCCTCTTTCCAGCCAGAGGTTGCCAGTACCCGAGAGCGTGC
TGCACATGTTCCCGGGCACGGAGGAGGGGCCTGCAGATGACAGTGCAAAACATGGGGGCC
GGGTGCGCACATTCCCCCACGAGCGGGGCAACTGGGCCACCCATGTCTACATACCTTATG
AAGCCAGGGAGGAGTTCCTGGACCTGCTTGACGTCCTGCTTCCCCACGCCCAGACATATG
TCCCCCGGCTGGTAAGGATGGAGGCGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGC
GCCACCACTGGATCCTCCCCTTCGTGCAGGTGCTGAAGGACCGCGTGGCCTCCTTCCAGA
GGTACAAGGAGCCCAAAGTGGCAAGGCGGCAAGTCCTGACTTCCAGTTCAGCGGAACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTCGTGGAGGGGGGCCCCATGAGTACGGCGCCCCTGGTGGGCTACAGCAGCAGTGGCT
CCGAGGATGAGGCCGAGGCCGAGGCCAAGGCCGGGACCCGGGCCCAGCCGGGGGCTAGAG
GCCGCAGTCGGGGCCAGAGCCCTCTTTCCAGCCAGAGGTTGCCAGTACCCGAGAGCGTGC
TGCACATGTTCCCGGGCACGGAGGAGGGGCCTGCAGATGACAGTGCAAAACATGGGGGCC
GGGTGCGCACATTCCCCCACGAGCGGGGCAACTGGGCCACCCATGTCTACATACCTTATG
AAGCCAGGGAGGAGTTCCTGGACCTGCTTGACGTCCTGCTTCCCCACGCCCAGACATATG
TCCCCCGGCTGGTAAGGATGGAGGCGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGC
GCCACCACTGGATCCTCCCCTTCGTGCAGGTGCTGAAGGACCGCGTGGCCTCCTTCCAGA
GGTACAAGGAGCCCAAAGTGGCAAGGCGGCAAGTCCTGACTTCCAGTTCAGCGGAACCAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q96FZ9_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q96FZ9_HUMAN

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               130-297, gnl|bosTau2|chr18 (22849571-22849738)
               

               
               130-297, gnl|Hg17|chr16 (56593883-56594050)
               

               
               130-297, gnl|Mm7|chr8 (93922411-93922578)
               


               
               300-483, gnl|bosTau2|chr18 (22851747-22851930)
               

               
               300-483, gnl|Hg17|chr16 (56601336-56601519)
               

               
               300-483, gnl|Mm7|chr8 (93927990-93928173)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               130-297, gnl|bosTau2|chr18 (22849571-22849738)
               

               
               130-297, gnl|Hg17|chr16 (56593883-56594050)
               

               
               130-297, gnl|Mm7|chr8 (93922411-93922578)
               


               
               300-483, gnl|bosTau2|chr18 (22851747-22851930)
               

               
               300-483, gnl|Hg17|chr16 (56601336-56601519)
               

               
               300-483, gnl|Mm7|chr8 (93927990-93928173)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	130-297, gnl\|bosTau2\|chr18 (22849571-22849738)
	130-297, gnl\|Hg17\|chr16 (56593883-56594050)
	130-297, gnl\|Mm7\|chr8 (93922411-93922578)

	300-483, gnl\|bosTau2\|chr18 (22851747-22851930)
	300-483, gnl\|Hg17\|chr16 (56601336-56601519)
	300-483, gnl\|Mm7\|chr8 (93927990-93928173)