Non-Coding RNA Search

Ss1.1-Pig2-75A05.5.5

Sequence:


               
               AGCAACGTGCTGCTCCTGAGGCTACCTGAACAAGTGCCCAGCGCCCCTCCCCAGGAGGTG
ACTCTAAGACCTGGCAATGGCAGTGTCCTTGTGAGCTGGGTGCCACCACCTGCCGAAAAC
CACAATGGCATCATCCGTGGCTACCAGGTCTGGAGCCTGGGCAACACTTCACTGCCCCCA
GCCAACTGGACCGTGGTGGGTGAGCAGACCCAGCTGGAGATCGCCACCCACATGCCAGGT
TCCTACTGCGTACAAGTGGCTGCAGTCACTGGGGCTGGGGCTGGGCAGCCCATCAGCCCT
GTCTGCCTCCTGTTAGAGCAGGCCATGGAGCAAGCTGCCCAAGAACCCAGTAGGCATGGT
CCATGGACCCTGGAGCAGCTGAGGGCAGCTTTGAAGCAGCCAGAGGTCATTGCCAGTGGG
GGTGTTGTGCTCTGGCTGCTGCTGATGGGCATCGCCGTGTGCATCCACCGCCGGCGCCGG
GCTGGCGTGCACCTGGGCCCAGGTCTGTACAGATATACCAGTGAGGATGCCATCCTAAAA
CACAGAACGGATCACAGTGACTCCCCATGGCTGGCAGACACTTGGCGCTCCACCTCCGGC
TCCCGGGACATCAGTAGTAGCAGCAGCCTCAGCAGCCGGCTGGGAGTGGACCCCCGGGAC
CCACTAGACAGTCGTCGCTCCTTGATCTCCTGGGATCCCCGAAGCCCCGGTGTGCCCCTG
CTCCCCGACACCAGCACCTTTTATGGCTCCCTCATCGCTGAGCTGCCCTCCAGCCCCCCA
GCCCGGCCAAGCCCCCAGGCCCCAGCTGTCAGGCGGCTCACCCCCCAGCTGACCCGGCTC
TCCAGCCCCTGGCCCAGTTCAGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAACGTGCTGCTCCTGAGGCTACCTGAACAAGTGCCCAGCGCCCCTCCCCAGGAGGTG
ACTCTAAGACCTGGCAATGGCAGTGTCCTTGTGAGCTGGGTGCCACCACCTGCCGAAAAC
CACAATGGCATCATCCGTGGCTACCAGGTCTGGAGCCTGGGCAACACTTCACTGCCCCCA
GCCAACTGGACCGTGGTGGGTGAGCAGACCCAGCTGGAGATCGCCACCCACATGCCAGGT
TCCTACTGCGTACAAGTGGCTGCAGTCACTGGGGCTGGGGCTGGGCAGCCCATCAGCCCT
GTCTGCCTCCTGTTAGAGCAGGCCATGGAGCAAGCTGCCCAAGAACCCAGTAGGCATGGT
CCATGGACCCTGGAGCAGCTGAGGGCAGCTTTGAAGCAGCCAGAGGTCATTGCCAGTGGG
GGTGTTGTGCTCTGGCTGCTGCTGATGGGCATCGCCGTGTGCATCCACCGCCGGCGCCGG
GCTGGCGTGCACCTGGGCCCAGGTCTGTACAGATATACCAGTGAGGATGCCATCCTAAAA
CACAGAACGGATCACAGTGACTCCCCATGGCTGGCAGACACTTGGCGCTCCACCTCCGGC
TCCCGGGACATCAGTAGTAGCAGCAGCCTCAGCAGCCGGCTGGGAGTGGACCCCCGGGAC
CCACTAGACAGTCGTCGCTCCTTGATCTCCTGGGATCCCCGAAGCCCCGGTGTGCCCCTG
CTCCCCGACACCAGCACCTTTTATGGCTCCCTCATCGCTGAGCTGCCCTCCAGCCCCCCA
GCCCGGCCAAGCCCCCAGGCCCCAGCTGTCAGGCGGCTCACCCCCCAGCTGACCCGGCTC
TCCAGCCCCTGGCCCAGTTCAGAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               145-325, gnl|bosTau2|chr29 (20723061-20723241)
               

               
               145-325, gnl|Hg17|chr11 (124269478-124269298)
               

               
               145-325, gnl|Mm7|chr9 (37334188-37334368)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-325, gnl|bosTau2|chr29 (20723061-20723241)
               

               
               145-325, gnl|Hg17|chr11 (124269478-124269298)
               

               
               145-325, gnl|Mm7|chr9 (37334188-37334368)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cov (0.132153)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)

	145-325, gnl\|bosTau2\|chr29 (20723061-20723241)
	145-325, gnl\|Hg17\|chr11 (124269478-124269298)
	145-325, gnl\|Mm7\|chr9 (37334188-37334368)