Non-Coding RNA Search

Ss1.1-Pig2-77A18.5

Sequence:


               
               GTTTTTATTTGTCTGGGATGCGGAAAGCAGGAAACAGAGAGAGGATGATAAACCAGTGGT
TTGAATGCCCTGGCTGGGGACATGATTATTCTGAATAAAAGTGGAATTCTCTCCACAAGG
AAGAAGAAAGGAAAAGATCTCAGGACGTCTCCAACGTTGCAGCTGTTAAAGATGAAGAGG
GCAGAGGTGAAGAAGGCAACTTGGAGAAGGTGGCGAAAAAAGTACATTTTCCCCCGGTCC
CTAGCAGTAAAGGAAATCCACATTGACTGAGTACCCTCCCGGGTGAGTCCTGGCCTGGGA
ACTTTCACAGAACTACTGTCCTGAATTGCTACCACCATCCTGTGAAGTAGGTATCATTAT
TCCCATTTCACAGATGAGAAAAGCTGAGGCTCAGAGAGATAGAGTCCTTGGTCTAAGATG
TGCAAGGTCTAGTAGAGTACTCAGTAAACATTTGTTGAATGAATGGACCACCCAGGCCAC
GTGCTTTCCAGTCTCCGGTGGGTTGTATCCTTGTGCCCTGTTTTTACCAGCAGCCTTCTT
GCTATCGAGAGGAGCCTCCTGCAGTTGAGCCATGGAGCAGTCACAACCTCCAACATGGTC
GCAGTAATGAAAAATGCAAAAAGTGGCTGGACCAAAACATGCCTATGCTGTATTTACCCT
CAAACAGAAAAGCTACTTAAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTATTTGTCTGGGATGCGGAAAGCAGGAAACAGAGAGAGGATGATAAACCAGTGGT
TTGAATGCCCTGGCTGGGGACATGATTATTCTGAATAAAAGTGGAATTCTCTCCACAAGG
AAGAAGAAAGGAAAAGATCTCAGGACGTCTCCAACGTTGCAGCTGTTAAAGATGAAGAGG
GCAGAGGTGAAGAAGGCAACTTGGAGAAGGTGGCGAAAAAAGTACATTTTCCCCCGGTCC
CTAGCAGTAAAGGAAATCCACATTGACTGAGTACCCTCCCGGGTGAGTCCTGGCCTGGGA
ACTTTCACAGAACTACTGTCCTGAATTGCTACCACCATCCTGTGAAGTAGGTATCATTAT
TCCCATTTCACAGATGAGAAAAGCTGAGGCTCAGAGAGATAGAGTCCTTGGTCTAAGATG
TGCAAGGTCTAGTAGAGTACTCAGTAAACATTTGTTGAATGAATGGACCACCCAGGCCAC
GTGCTTTCCAGTCTCCGGTGGGTTGTATCCTTGTGCCCTGTTTTTACCAGCAGCCTTCTT
GCTATCGAGAGGAGCCTCCTGCAGTTGAGCCATGGAGCAGTCACAACCTCCAACATGGTC
GCAGTAATGAAAAATGCAAAAAGTGGCTGGACCAAAACATGCCTATGCTGTATTTACCCT
CAAACAGAAAAGCTACTTAAAAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               138-684, gnl|bosTau2|chr12 (6277449-6276928)
               

               
               138-684, gnl|Hg17|chr13 (44123782-44124333)
               

               
               138-684, gnl|Mm7|chr14 (71055700-71055187)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-684, gnl|bosTau2|chr12 (6277449-6276928)
               

               
               138-684, gnl|Hg17|chr13 (44123782-44124333)
               

               
               138-684, gnl|Mm7|chr14 (71055700-71055187)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	138-684, gnl\|bosTau2\|chr12 (6277449-6276928)
	138-684, gnl\|Hg17\|chr13 (44123782-44124333)
	138-684, gnl\|Mm7\|chr14 (71055700-71055187)