Ss1.1-Pig2-77J07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACCGCGTGGTGTTTCAGGATAAAGAATACACCATTGAGGAAATAGAGGCGGGCAGGGT CCCAAACCCACACCTGGGCCCAGCAGAGGAGCGTCTGGCCTTGTATGTCCTCCAGCAGCA GGGCCTGGTCCCTGAACACGTGGAGTCCCGCCCCCTCTATAGCCCCCTGCAGCCGGACAT CGAGCAGGGGAAGCTGCAGATGTGGATCGACCTGTTTCCAAAGGCCCTGGGGCGGCCGGG ACCTCCCTTCAACATCACCCCACGGAGAGCCAGGAGGTTTTTCCTGCGTTGTATTATCTG GAACACCAAGGATGTGATTCTGGATGACCTCAGCATCACCGGGGAGAAGATGAGTGACAT TTACGTGAAAGGCTGGATGGTGGGCTTTGAAGAACACAAGCAGAAGACAGATGTGCATTA TCGGTCCCTGGGAGGCGAAGGCAACTTTAACTGGAGGTTCGTTTTCCCTTTCGACTACCT GCCAGCTGAGCAAGTCTGCACCGTCTCCAAGAAGGATGCTTTCTGGAGGCTGGACAAGAC TGAGAGCAAGATCCCTGCGCGAGTAGTCTTCCAGATTTGGGACAACGACAAGTTCTCCTT TGATGACTTTTTGGGCTCTTTGCAGCTCGACCTCAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACCGCGTGGTGTTTCAGGATAAAGAATACACCATTGAGGAAATAGAGGCGGGCAGGGT CCCAAACCCACACCTGGGCCCAGCAGAGGAGCGTCTGGCCTTGTATGTCCTCCAGCAGCA GGGCCTGGTCCCTGAACACGTGGAGTCCCGCCCCCTCTATAGCCCCCTGCAGCCGGACAT CGAGCAGGGGAAGCTGCAGATGTGGATCGACCTGTTTCCAAAGGCCCTGGGGCGGCCGGG ACCTCCCTTCAACATCACCCCACGGAGAGCCAGGAGGTTTTTCCTGCGTTGTATTATCTG GAACACCAAGGATGTGATTCTGGATGACCTCAGCATCACCGGGGAGAAGATGAGTGACAT TTACGTGAAAGGCTGGATGGTGGGCTTTGAAGAACACAAGCAGAAGACAGATGTGCATTA TCGGTCCCTGGGAGGCGAAGGCAACTTTAACTGGAGGTTCGTTTTCCCTTTCGACTACCT GCCAGCTGAGCAAGTCTGCACCGTCTCCAAGAAGGATGCTTTCTGGAGGCTGGACAAGAC TGAGAGCAAGATCCCTGCGCGAGTAGTCTTCCAGATTTGGGACAACGACAAGTTCTCCTT TGATGACTTTTTGGGCTCTTTGCAGCTCGACCTCAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 45-188, gnl|bosTau2|chr11 (10574351-10574494) | |
| 45-188, gnl|Hg17|chr2 (71806159-71806301) | |
| 45-188, gnl|Mm7|chr6 (84222581-84222724) | |
| 374-515, gnl|bosTau2|chr11 (10576418-10576559) | |
| 374-515, gnl|canFam2|chr17 (54105433-54105284) | |
| 374-515, gnl|danRer3|chr14 (17852369-17852518) | |
| 374-515, gnl|dasNov1|scaffold_63686 (6920-6771) | |
| 374-515, gnl|echTel1|scaffold_318670 (6467-6616) | |
| 374-515, gnl|fr1|chrUn (119190215-119190361) | |
| 374-515, gnl|galGal2|chrUn (69719193-69719341) | |
| 374-515, gnl|hg17|chr2 (71808388-71808537) | |
| 374-515, gnl|Hg17|chr2 (71808391-71808532) | |
| 374-515, gnl|loxAfr1|scaffold_49729 (11258-11109) | |
| 374-515, gnl|mm7|chr6 (84224864-84225013) | |
| 374-515, gnl|Mm7|chr6 (84224867-84225008) | |
| 374-515, gnl|monDom2|scaffold_157 (398261-398112) | |
| 374-515, gnl|oryCun1|scaffold_182688 (5978-6127) | |
| 374-515, gnl|panTro1|chr12 (74204752-74204901) | |
| 374-515, gnl|rheMac2|chr13 (71929073-71929222) | |
| 374-515, gnl|rn3|chr4 (118599801-118599950) | |
| 374-515, gnl|tetNig1|chrUn_random (13049236-13049090) | |
| 374-515, gnl|xenTro1|scaffold_140 (1127444-1127298) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 45-188, gnl|bosTau2|chr11 (10574351-10574494) | |
| 45-188, gnl|Hg17|chr2 (71806159-71806301) | |
| 45-188, gnl|Mm7|chr6 (84222581-84222724) | |
| 374-515, gnl|bosTau2|chr11 (10576418-10576559) | |
| 374-515, gnl|canFam2|chr17 (54105433-54105284) | |
| 374-515, gnl|danRer3|chr14 (17852369-17852518) | |
| 374-515, gnl|dasNov1|scaffold_63686 (6920-6771) | |
| 374-515, gnl|echTel1|scaffold_318670 (6467-6616) | |
| 374-515, gnl|fr1|chrUn (119190215-119190361) | |
| 374-515, gnl|galGal2|chrUn (69719193-69719341) | |
| 374-515, gnl|hg17|chr2 (71808388-71808537) | |
| 374-515, gnl|Hg17|chr2 (71808391-71808532) | |
| 374-515, gnl|loxAfr1|scaffold_49729 (11258-11109) | |
| 374-515, gnl|mm7|chr6 (84224864-84225013) | |
| 374-515, gnl|Mm7|chr6 (84224867-84225008) | |
| 374-515, gnl|monDom2|scaffold_157 (398261-398112) | |
| 374-515, gnl|oryCun1|scaffold_182688 (5978-6127) | |
| 374-515, gnl|panTro1|chr12 (74204752-74204901) | |
| 374-515, gnl|rheMac2|chr13 (71929073-71929222) | |
| 374-515, gnl|rn3|chr4 (118599801-118599950) | |
| 374-515, gnl|tetNig1|chrUn_random (13049236-13049090) | |
| 374-515, gnl|xenTro1|scaffold_140 (1127444-1127298) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) | |
| cov (0.132153) |