Non-Coding RNA Search

Ss1.1-Pig2-78J22.5

Sequence:


               
               CTGATATAATCATGGCCTAGAAATGGCCGATAAAATAGTTAGGGGCCCATATTCTAGAAT
AAGACTTCCTGGGTTGAATGCAGATTCTACCACTGATTTATATATTCTTACGCTTACATT
CTCTAAGCCTCAGTTTCCTTCTCTGTATAGAGAGTACATTACCCAGCCTATAAAGTTAAA
CATGGAGAAATGATAGGTGCTATTGTTGTTGTTGCCAAAAATAATGAGTCCGTCTTCTTG
GTGTTAAAGCCAAAGCAGAGCTAGTGAATTAGAAAATGAAAAGGTGTTATCAATTGAAGG
AAACTTAACAAGAATTGTGAAAGATTTGTAGATTAAAAAGAGATTATTTATCTGGTCATC
TTTCCCCATTAAACTTTTAGCCAAAAGTGGCAGTGAACTTTGCTCTGTTCCTGGAGGCCA
GAAATCCCACCCGTATTTTAGCATTGTCCTAGATGGATGTGATAATGCAGAAAAATGGAA
AGCATTCCTAATCTGCAACAACACAGGCAGCAACATGCATAGGGAGTAACTTTTAGAAAA
GAATTAGCTACTTTATTCCTGGGCTTCAAGGCCTCGAGACTCATTACTGTTATGTATTTC
TCATATCAAGTTGGGAAGCCAAATGAGCAATAAAAAGCGAATATGATAACCTACCCCCAC
AAACTGAATGTTCTGTTCCACAGGTGGAAAGGACAGTGCTACTGGGGCCTTTCTTACATG
GGGACCAACATCCATTCACTTCTGCCTTCCATCTCTACAAGAAACAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGATATAATCATGGCCTAGAAATGGCCGATAAAATAGTTAGGGGCCCATATTCTAGAAT
AAGACTTCCTGGGTTGAATGCAGATTCTACCACTGATTTATATATTCTTACGCTTACATT
CTCTAAGCCTCAGTTTCCTTCTCTGTATAGAGAGTACATTACCCAGCCTATAAAGTTAAA
CATGGAGAAATGATAGGTGCTATTGTTGTTGTTGCCAAAAATAATGAGTCCGTCTTCTTG
GTGTTAAAGCCAAAGCAGAGCTAGTGAATTAGAAAATGAAAAGGTGTTATCAATTGAAGG
AAACTTAACAAGAATTGTGAAAGATTTGTAGATTAAAAAGAGATTATTTATCTGGTCATC
TTTCCCCATTAAACTTTTAGCCAAAAGTGGCAGTGAACTTTGCTCTGTTCCTGGAGGCCA
GAAATCCCACCCGTATTTTAGCATTGTCCTAGATGGATGTGATAATGCAGAAAAATGGAA
AGCATTCCTAATCTGCAACAACACAGGCAGCAACATGCATAGGGAGTAACTTTTAGAAAA
GAATTAGCTACTTTATTCCTGGGCTTCAAGGCCTCGAGACTCATTACTGTTATGTATTTC
TCATATCAAGTTGGGAAGCCAAATGAGCAATAAAAAGCGAATATGATAACCTACCCCCAC
AAACTGAATGTTCTGTTCCACAGGTGGAAAGGACAGTGCTACTGGGGCCTTTCTTACATG
GGGACCAACATCCATTCACTTCTGCCTTCCATCTCTACAAGAAACAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               67-766, gnl|bosTau2|chr2 (5675048-5675780)
               

               
               67-766, gnl|Hg17|chr2 (191060407-191061158)
               

               
               67-766, gnl|Mm7|chr1 (53024305-53023660)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-766, gnl|bosTau2|chr2 (5675048-5675780)
               

               
               67-766, gnl|Hg17|chr2 (191060407-191061158)
               

               
               67-766, gnl|Mm7|chr1 (53024305-53023660)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nca (0.136874)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nca (0.136874)

	67-766, gnl\|bosTau2\|chr2 (5675048-5675780)
	67-766, gnl\|Hg17\|chr2 (191060407-191061158)
	67-766, gnl\|Mm7\|chr1 (53024305-53023660)