Ss1.1-Pig2-79D13.5
|
GCTTCGTGGTTGAGCTGCAATAGTGTCAATGAAGGTGGCTTTGCTGACTCTGATAGCCGT
TCATCCTTCAAGACTAGTGAAGGTGGAGAAGGCCGGGCTGGGGGAAGCAGAGGGGAGGCT
GAGAAGGCTTCCAGCTCAGGGCTGGGCTTCAAGGATGAGGGAGACATCAAGCAGGCCAAG
AAAGAGGACCCTGATGACCGAAGCAAGATGTCAATAGTTACTGAAAGCTCTCGAAATTAT
GGTTACAATCCTTCTCCTGTGAAGATTGAAGGACTTCGCCGCCCACCAAGTAAGACTAGT
ATGCATCAGAGCCGACGACTCTTGGCCTTTGCTCAGTCGAACCCTGATGATATCCTGACA
CTGTCCAGCAGCACAGAAAGTGAGGGGGAAAGTGGGACCAGCCGAAAGCCCACTGCTGGT
CAGACTTCAGCCACAGCCGTTGACAGTGATGATATCCAGACCATCTCGTCTGGCTCTGAA
GGGGATGACTTTGAGGACAAGAAGAACATGTCTGGTCCAGTGAAGCGCCAAGTGGCAGTT
AAATCAACCCGGGGTTTTGCTCTCAAATCAACCCATGGGATTGCCATTAAATCAACCAAC
ATGGCATCCGTGGAAAAGGGGGAGAGCGCGCCTGTTCGTAAGAACACACGCCAGTTCTAC
GATGGTGAGGAGTCTTGCTACATCATCGACGCCAAGCTTGAAGGCAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCTTCGTGGTTGAGCTGCAATAGTGTCAATGAAGGTGGCTTTGCTGACTCTGATAGCCGT
TCATCCTTCAAGACTAGTGAAGGTGGAGAAGGCCGGGCTGGGGGAAGCAGAGGGGAGGCT
GAGAAGGCTTCCAGCTCAGGGCTGGGCTTCAAGGATGAGGGAGACATCAAGCAGGCCAAG
AAAGAGGACCCTGATGACCGAAGCAAGATGTCAATAGTTACTGAAAGCTCTCGAAATTAT
GGTTACAATCCTTCTCCTGTGAAGATTGAAGGACTTCGCCGCCCACCAAGTAAGACTAGT
ATGCATCAGAGCCGACGACTCTTGGCCTTTGCTCAGTCGAACCCTGATGATATCCTGACA
CTGTCCAGCAGCACAGAAAGTGAGGGGGAAAGTGGGACCAGCCGAAAGCCCACTGCTGGT
CAGACTTCAGCCACAGCCGTTGACAGTGATGATATCCAGACCATCTCGTCTGGCTCTGAA
GGGGATGACTTTGAGGACAAGAAGAACATGTCTGGTCCAGTGAAGCGCCAAGTGGCAGTT
AAATCAACCCGGGGTTTTGCTCTCAAATCAACCCATGGGATTGCCATTAAATCAACCAAC
ATGGCATCCGTGGAAAAGGGGGAGAGCGCGCCTGTTCGTAAGAACACACGCCAGTTCTAC
GATGGTGAGGAGTCTTGCTACATCATCGACGCCAAGCTTGAAGGCAAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-187, gnl|bosTau2|chr3 (16590080-16589894) |
|
1-187, gnl|Hg17|chr1 (147746555-147746741) |
|
1-187, gnl|Mm7|chr3 (95201342-95201156) |
| |
|
216-349, gnl|bosTau2|chr3 (16588913-16588780) |
|
216-349, gnl|canFam2|chr17 (63146320-63146453) |
|
216-349, gnl|dasNov1|scaffold_10698 (6138-6271) |
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216-349, gnl|hg17|chr1 (147748137-147748270) |
|
216-349, gnl|Hg17|chr1 (147748136-147748269) |
|
216-349, gnl|loxAfr1|scaffold_17476 (14205-14073) |
|
216-349, gnl|mm7|chr3 (95200222-95200092) |
|
216-349, gnl|Mm7|chr3 (95200221-95200091) |
|
216-349, gnl|monDom2|scaffold_44 (4132820-4132953) |
|
216-349, gnl|panTro1|chr1 (129481918-129482051) |
|
216-349, gnl|rheMac2|chr1 (129370900-129371033) |
|
216-349, gnl|rn3|chr2 (190197598-190197468) |
|
216-349, gnl|xenTro1|scaffold_122 (2097869-2097739) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-187, gnl|bosTau2|chr3 (16590080-16589894) |
|
1-187, gnl|Hg17|chr1 (147746555-147746741) |
|
1-187, gnl|Mm7|chr3 (95201342-95201156) |
| |
|
216-349, gnl|bosTau2|chr3 (16588913-16588780) |
|
216-349, gnl|canFam2|chr17 (63146320-63146453) |
|
216-349, gnl|dasNov1|scaffold_10698 (6138-6271) |
|
216-349, gnl|hg17|chr1 (147748137-147748270) |
|
216-349, gnl|Hg17|chr1 (147748136-147748269) |
|
216-349, gnl|loxAfr1|scaffold_17476 (14205-14073) |
|
216-349, gnl|mm7|chr3 (95200222-95200092) |
|
216-349, gnl|Mm7|chr3 (95200221-95200091) |
|
216-349, gnl|monDom2|scaffold_44 (4132820-4132953) |
|
216-349, gnl|panTro1|chr1 (129481918-129482051) |
|
216-349, gnl|rheMac2|chr1 (129370900-129371033) |
|
216-349, gnl|rn3|chr2 (190197598-190197468) |
|
216-349, gnl|xenTro1|scaffold_122 (2097869-2097739) |
|
cga (0.279096) |
|
cly (0.120642) |
|
cga (0.279096) |
|
cly (0.120642) |
