Non-Coding RNA Search

Ss1.1-Pig2-79F17.5

Sequence:


               
               GTTTGGGGAAAGGAAGCTTCAGTTCCTCTAATAGACTCTTCAGAAATAGTTTCTTTGTTT
ATCAAGAGATTTGCAGAAGTTAAAATGATAGGAGTTGTGTTTCACTTCAGCTTTAAATAA
TGTGACTTCCGAAACTTATTTTCATTTTCTTTTTATTTGAAATTCTCTGTAAGTGGAGTT
ATTGCATACCCATTCTATTTTACTGTTTAAATGTATAGGGAGAAGCCTACTAAAAAAATA
ATCATGTAACAGTTATTTTGGATCTTCCAAGGTATAAAATTATATAATGTTTCTCTTGTA
ATAGCAAATGGAGATATTTAATTCTTTTGAAAAATAGAATAGTCTTTGGTGAACATAGAT
GTATGTATGTTATCTTTAAAGTTTTCTTTGAACTATTATTGGGGTCTTTTTTGTTAACTT
TTTTAGGTGAGGAGAAAGGAAGTAGTAGTATTTCGTAACGTCCAGAACTTTGAACTCTAC
ACTGAGATGTATAAAGGATGAGTGCTTTGAGTCCTAGTATTCATTAAATTCTAATGTTAT
GTTTTCAATTTCTTTGTTTCAGAATAAGAAAACACATAGTCCACCAGTTTTGCTACTAAA
TGTAATAAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGGGGAAAGGAAGCTTCAGTTCCTCTAATAGACTCTTCAGAAATAGTTTCTTTGTTT
ATCAAGAGATTTGCAGAAGTTAAAATGATAGGAGTTGTGTTTCACTTCAGCTTTAAATAA
TGTGACTTCCGAAACTTATTTTCATTTTCTTTTTATTTGAAATTCTCTGTAAGTGGAGTT
ATTGCATACCCATTCTATTTTACTGTTTAAATGTATAGGGAGAAGCCTACTAAAAAAATA
ATCATGTAACAGTTATTTTGGATCTTCCAAGGTATAAAATTATATAATGTTTCTCTTGTA
ATAGCAAATGGAGATATTTAATTCTTTTGAAAAATAGAATAGTCTTTGGTGAACATAGAT
GTATGTATGTTATCTTTAAAGTTTTCTTTGAACTATTATTGGGGTCTTTTTTGTTAACTT
TTTTAGGTGAGGAGAAAGGAAGTAGTAGTATTTCGTAACGTCCAGAACTTTGAACTCTAC
ACTGAGATGTATAAAGGATGAGTGCTTTGAGTCCTAGTATTCATTAAATTCTAATGTTAT
GTTTTCAATTTCTTTGTTTCAGAATAAGAAAACACATAGTCCACCAGTTTTGCTACTAAA
TGTAATAAATTC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               22-544, gnl|bosTau2|chr3 (77719384-77718836)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-544, gnl|bosTau2|chr3 (77719384-77718836)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

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               ret (0.257467)
               

               
               col (0.195008)
               

               
               fhi (0.169578)
               

               
               fco (0.157208)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ret (0.257467)
               

               
               col (0.195008)
               

               
               fhi (0.169578)
               

               
               fco (0.157208)
               

               
               lin (0.145603)
               

               
               tra (0.123092)

	ret (0.257467)
	col (0.195008)
	fhi (0.169578)
	fco (0.157208)
	lin (0.145603)
	tra (0.123092)