Non-Coding RNA Search

Ss1.1-Pig2-79O17.5

Sequence:


               
               CTCAAGGAGCACCCTGGGATTGTCATCTACATTCGTTCCTCTGGAACGTTTGTCACAGCA
TCTGGTCTCCTGCAGTCTGAGGAGGAATTGGAAATTGGTCTCTTTTGAGTGCAGAGTGAA
GTGAGAAGGCAGCTTAAATCGGCTCTCGCAGAGTTACCACACAGGTTTGACGAGCTAGTG
ACACATCTTCACGATGCAAAGATGCTTCCAGCAGCAGCACACCTTACGGCGGGGACCTCT
TAACAGGATGCAGTCTGTCTGCGGACCAAACTCTACTACGCAGAACAACCCTTTCTGTGG
AAATTAGGTTTTCCCGTGCCTTGCTTTCTTTCTTGGTCTCTTGTTTTATTGGCCTAGCTA
CCTTCGTGTGACACAATTCTCTCTAAGGTTTAGAAAACTGCTCCCAGTTAACTTTGGCTC
TGGGTCTTCTAGGAATTTATCTTAGCTACCCATGAATTAGGGGTTTCTCCTGCCTTATGA
AAAATCCACATCTTCCAGAGTCTTGCCCCCACCCCCCAAAAGCCAAGTCTTCTTAGAGCT
GGACCAGCTGTTCCTTGGGGGCTGGCGTAGGCAGGGAGTCCCTCTGGAAGGCCTGTGCGT
CTGGCCCCGCGTGGGGTGGCGGCCCAGCAGCACTTCCTCCATGTTCTGAGGGAGCCGCGA
GGTGAGTTTCTCTCCAGGCGTCACCTTGTGGGGGACGGAGGAGTGGGGTGACAGGCTACA
GGGAGAGGCGTTTGTGGGAATCATGGACTTGGAGAGAGTCACCTGGCGGCCTCGTGGCGA
ACTCGGGCTGGTTGAGGGTGAGGGCTTCGATTGGTGAGGATTCTGCCTCTGAAATGGAAA
CGTGGCCATTGGGTCTTGGCTCAGAGGATTGCGTGACGGTGGAGAAAGCCAAAGCTTGGG
CTGCTTTGTGGGGACAGTGAGCTGCCCGGGGCCCCTCAGAGGCAAGATGCAGTCCTGAGT
GGTTCCTGAAGCAGAGCAAAGGCCGGGGACGGTTCCCTGCTAAGAGCCTCTCTTCAGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAAGGAGCACCCTGGGATTGTCATCTACATTCGTTCCTCTGGAACGTTTGTCACAGCA
TCTGGTCTCCTGCAGTCTGAGGAGGAATTGGAAATTGGTCTCTTTTGAGTGCAGAGTGAA
GTGAGAAGGCAGCTTAAATCGGCTCTCGCAGAGTTACCACACAGGTTTGACGAGCTAGTG
ACACATCTTCACGATGCAAAGATGCTTCCAGCAGCAGCACACCTTACGGCGGGGACCTCT
TAACAGGATGCAGTCTGTCTGCGGACCAAACTCTACTACGCAGAACAACCCTTTCTGTGG
AAATTAGGTTTTCCCGTGCCTTGCTTTCTTTCTTGGTCTCTTGTTTTATTGGCCTAGCTA
CCTTCGTGTGACACAATTCTCTCTAAGGTTTAGAAAACTGCTCCCAGTTAACTTTGGCTC
TGGGTCTTCTAGGAATTTATCTTAGCTACCCATGAATTAGGGGTTTCTCCTGCCTTATGA
AAAATCCACATCTTCCAGAGTCTTGCCCCCACCCCCCAAAAGCCAAGTCTTCTTAGAGCT
GGACCAGCTGTTCCTTGGGGGCTGGCGTAGGCAGGGAGTCCCTCTGGAAGGCCTGTGCGT
CTGGCCCCGCGTGGGGTGGCGGCCCAGCAGCACTTCCTCCATGTTCTGAGGGAGCCGCGA
GGTGAGTTTCTCTCCAGGCGTCACCTTGTGGGGGACGGAGGAGTGGGGTGACAGGCTACA
GGGAGAGGCGTTTGTGGGAATCATGGACTTGGAGAGAGTCACCTGGCGGCCTCGTGGCGA
ACTCGGGCTGGTTGAGGGTGAGGGCTTCGATTGGTGAGGATTCTGCCTCTGAAATGGAAA
CGTGGCCATTGGGTCTTGGCTCAGAGGATTGCGTGACGGTGGAGAAAGCCAAAGCTTGGG
CTGCTTTGTGGGGACAGTGAGCTGCCCGGGGCCCCTCAGAGGCAAGATGCAGTCCTGAGT
GGTTCCTGAAGCAGAGCAAAGGCCGGGGACGGTTCCCTGCTAAGAGCCTCTCTTCAGTCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               5-497, gnl|bosTau2|chrX (39684529-39685020)
               

               
               5-497, gnl|Hg17|chrX (18671051-18670542)
               

               
               5-497, gnl|Mm7|chrX (155365678-155366155)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-497, gnl|bosTau2|chrX (39684529-39685020)
               

               
               5-497, gnl|Hg17|chrX (18671051-18670542)
               

               
               5-497, gnl|Mm7|chrX (155365678-155366155)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	5-497, gnl\|bosTau2\|chrX (39684529-39685020)
	5-497, gnl\|Hg17\|chrX (18671051-18670542)
	5-497, gnl\|Mm7\|chrX (155365678-155366155)