Ss1.1-Pig2-80I07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGTGGAGTTCGGCAGCTACGCGGACGCCCTGTGGTGGGGGGTGGTCACCGTCACCACCA TCGGCTACGGGGACAAGGTGCCCCAGACGTGGGTGGGGAAGACCATCGCCTCCTGCTTCT CCGTCTTCGCCATCTCCTTCTTCGCGCTCCCGGCGGGGATTCTCGGCTCTGGTTTTGCCC TGAAGGTCCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCT CGCTCATCCAGACGGCGTGGCGGTGCTACGCGGCCGAGAACCCCGACTCCTCCACCTGGA AAATCTACGTCCGGAAGCCCTCGCGGAGCCAGGCTCTGCTCTCCCCCAGCCCCAAGCCCA AGAAGTCTGTCATGGTAAAGAAAAAGAAATTCAAACTGGACAAGGACAACGGGCTGAGTC CGGGAGAGAAGATGCTGGCGGTCCCGCAGATCACGTGTGACCTCGCGTCGGAGGAGCAGA GGCCTGACCACTTCTCGGTGGATGGCTGTGACAATTCTGGACATCCTGGGAAAATCATTG CCATTGCTGTCATAGACCTAGGGCTGATTTCATCAGTATATTATGAAGCTCTTCATGAAG ACAAAAAGATAAGAAGATGCAAAAACAGTTCTCAGAAAAGGAAATACTAGTGATTCTTAA GGATAAAAAGATGCAGAGAACCTCAATGATGATAAAGAGAAAGGCAAATTAAAGCAATGG GGTTTTTTAAACCTAGTGGCTCACTAAGGAGTTTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGTGGAGTTCGGCAGCTACGCGGACGCCCTGTGGTGGGGGGTGGTCACCGTCACCACCA TCGGCTACGGGGACAAGGTGCCCCAGACGTGGGTGGGGAAGACCATCGCCTCCTGCTTCT CCGTCTTCGCCATCTCCTTCTTCGCGCTCCCGGCGGGGATTCTCGGCTCTGGTTTTGCCC TGAAGGTCCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCAGCCT CGCTCATCCAGACGGCGTGGCGGTGCTACGCGGCCGAGAACCCCGACTCCTCCACCTGGA AAATCTACGTCCGGAAGCCCTCGCGGAGCCAGGCTCTGCTCTCCCCCAGCCCCAAGCCCA AGAAGTCTGTCATGGTAAAGAAAAAGAAATTCAAACTGGACAAGGACAACGGGCTGAGTC CGGGAGAGAAGATGCTGGCGGTCCCGCAGATCACGTGTGACCTCGCGTCGGAGGAGCAGA GGCCTGACCACTTCTCGGTGGATGGCTGTGACAATTCTGGACATCCTGGGAAAATCATTG CCATTGCTGTCATAGACCTAGGGCTGATTTCATCAGTATATTATGAAGCTCTTCATGAAG ACAAAAAGATAAGAAGATGCAAAAACAGTTCTCAGAAAAGGAAATACTAGTGATTCTTAA GGATAAAAAGATGCAGAGAACCTCAATGATGATAAAGAGAAAGGCAAATTAAAGCAATGG GGTTTTTTAAACCTAGTGGCTCACTAAGGAGTTTGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 44-156, gnl|bosTau2|chr29 (43477763-43477875) | |
| 44-156, gnl|canFam2|chr18 (49624720-49624849) | |
| 44-156, gnl|danRer3|chr7 (39891401-39891527) | |
| 44-156, gnl|dasNov1|scaffold_162862 (4303-4176) | |
| 44-156, gnl|echTel1|scaffold_266297 (1756-1894) | |
| 44-156, gnl|fr1|chrUn (291240467-291240340) | |
| 44-156, gnl|galGal2|chr5 (11019635-11019503) | |
| 44-156, gnl|hg17|chr11 (2561229-2561361) | |
| 44-156, gnl|Hg17|chr11 (2561240-2561352) | |
| 44-156, gnl|loxAfr1|scaffold_3806 (474-348) | |
| 44-156, gnl|mm7|chr7 (139618688-139618820) | |
| 44-156, gnl|Mm7|chr7 (139618699-139618811) | |
| 44-156, gnl|monDom2|scaffold_661 (14533-14401) | |
| 44-156, gnl|oryCun1|scaffold_202047 (154592-154460) | |
| 44-156, gnl|panTro1|chr9 (2748981-2749113) | |
| 44-156, gnl|rheMac2|chr14 (2593184-2593316) | |
| 44-156, gnl|rn3|chr1 (203621618-203621750) | |
| 44-156, gnl|tetNig1|chr5 (11380383-11380509) | |
| 44-156, gnl|xenTro1|scaffold_146 (1460297-1460167) | |
| 249-378, gnl|bosTau2|chr29 (43480109-43480238) | |
| 249-378, gnl|canFam2|chr18 (49627895-49628027) | |
| 249-378, gnl|echTel1|scaffold_266297 (2566-2702) | |
| 249-378, gnl|fr1|chrUn (291239197-291239062) | |
| 249-378, gnl|hg17|chr11 (2565371-2565505) | |
| 249-378, gnl|Hg17|chr11 (2565373-2565502) | |
| 249-378, gnl|mm7|chr7 (139621497-139621631) | |
| 249-378, gnl|Mm7|chr7 (139621499-139621628) | |
| 249-378, gnl|monDom2|scaffold_661 (10966-10831) | |
| 249-378, gnl|panTro1|chr9 (2746031-2746165) | |
| 249-378, gnl|rheMac2|chr14 (2597360-2597494) | |
| 249-378, gnl|rn3|chr1 (203624466-203624600) | |
| 249-378, gnl|tetNig1|chr5 (11381544-11381668) | |
| 249-378, gnl|xenTro1|scaffold_146 (1457864-1457736) | |
| 523-716, gnl|bosTau2|chr29 (43491708-43491893) | |
| 523-716, gnl|Hg17|chr11 (2574748-2574942) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 44-156, gnl|bosTau2|chr29 (43477763-43477875) | |
| 44-156, gnl|canFam2|chr18 (49624720-49624849) | |
| 44-156, gnl|danRer3|chr7 (39891401-39891527) | |
| 44-156, gnl|dasNov1|scaffold_162862 (4303-4176) | |
| 44-156, gnl|echTel1|scaffold_266297 (1756-1894) | |
| 44-156, gnl|fr1|chrUn (291240467-291240340) | |
| 44-156, gnl|galGal2|chr5 (11019635-11019503) | |
| 44-156, gnl|hg17|chr11 (2561229-2561361) | |
| 44-156, gnl|Hg17|chr11 (2561240-2561352) | |
| 44-156, gnl|loxAfr1|scaffold_3806 (474-348) | |
| 44-156, gnl|mm7|chr7 (139618688-139618820) | |
| 44-156, gnl|Mm7|chr7 (139618699-139618811) | |
| 44-156, gnl|monDom2|scaffold_661 (14533-14401) | |
| 44-156, gnl|oryCun1|scaffold_202047 (154592-154460) | |
| 44-156, gnl|panTro1|chr9 (2748981-2749113) | |
| 44-156, gnl|rheMac2|chr14 (2593184-2593316) | |
| 44-156, gnl|rn3|chr1 (203621618-203621750) | |
| 44-156, gnl|tetNig1|chr5 (11380383-11380509) | |
| 44-156, gnl|xenTro1|scaffold_146 (1460297-1460167) | |
| 249-378, gnl|bosTau2|chr29 (43480109-43480238) | |
| 249-378, gnl|canFam2|chr18 (49627895-49628027) | |
| 249-378, gnl|echTel1|scaffold_266297 (2566-2702) | |
| 249-378, gnl|fr1|chrUn (291239197-291239062) | |
| 249-378, gnl|hg17|chr11 (2565371-2565505) | |
| 249-378, gnl|Hg17|chr11 (2565373-2565502) | |
| 249-378, gnl|mm7|chr7 (139621497-139621631) | |
| 249-378, gnl|Mm7|chr7 (139621499-139621628) | |
| 249-378, gnl|monDom2|scaffold_661 (10966-10831) | |
| 249-378, gnl|panTro1|chr9 (2746031-2746165) | |
| 249-378, gnl|rheMac2|chr14 (2597360-2597494) | |
| 249-378, gnl|rn3|chr1 (203624466-203624600) | |
| 249-378, gnl|tetNig1|chr5 (11381544-11381668) | |
| 249-378, gnl|xenTro1|scaffold_146 (1457864-1457736) | |
| 523-716, gnl|bosTau2|chr29 (43491708-43491893) | |
| 523-716, gnl|Hg17|chr11 (2574748-2574942) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) |