Ss1.1-Pig2-81D22.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTCCATGTCAGCTGTGGAGGTGCCACAGTCTGCTCCAATGTACCAGTACCTGGATAGGAA GATGTTCCGGGAAGCCTACCAGATTGCTTGCTTGGGTGTGACAGACACTGACTGGCGTGA GCTGGCCATGGAAGCTCTAGAAGGATTGGAGTTTGAGACAGCAAAGAAGGCCTTCACCCG AGTGCAGGACTTCCGCTATTTACAGCTCAGCAGCAGCATCGAGGAGAGGAAGAAGCGGGG AGAGACCAACAATGACCTGTTTCTGGCAGATGTGTTTTCCTACCAGGGGAAGTTCCACGA GGCCGCCAAACTGTATAAGAGGAGCGGGCATGAGAGCCTCGCACTCGACATGTACACGGA CCTGCGCATGTTTGAGTATGCCAAGGATTTCCTTGGATCTGGAGACCCCAAAGAAACAAG GATGCTGATCACCAAACAGGCCGACTGGGCCAGAAATATCAATGAGCCCAAAGCTGCTGT GGAGATGTACATCTCAGCAGGCGAGCACAGCAAGGCCATAGAGATCAGCGGTGACCATGG CTGGGTGGATACGCTCATCGACATTGCCCGGAAGCTGGACAAGGCGGAGCGGGAGCCCCT GCTGATGTGCGCTCACTACTTCAAGAAGCTGGACAACCCTGGCTATGCTGCTGAGACCTA CCTAAAGATAGGGGACCTGAAGTCCTTGGTTCAGCTGCATGTGGAGACCCAGCGCTGGGA TGAGGCCTTTGCTTTGGGGGAGAAGTATCCTGAATTTAAGGATGACATCTATGTGCCCTA TGCTCAGTGGCTGTGTTTCCGATTCCGTTTTGAGGAAGCCCAGAAAGCGTTCCACAAGGC CGGGCGGCAGGGGGAAGCAGTCCGGGTGCTGGAGCAGCTCACGCACAATGCTGTGGTAGA GAGCAGATTTAATGACGCTGCCTATTATTACTGGATGCTGTCCATGCAGTGCCTCGATAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTCCATGTCAGCTGTGGAGGTGCCACAGTCTGCTCCAATGTACCAGTACCTGGATAGGAA GATGTTCCGGGAAGCCTACCAGATTGCTTGCTTGGGTGTGACAGACACTGACTGGCGTGA GCTGGCCATGGAAGCTCTAGAAGGATTGGAGTTTGAGACAGCAAAGAAGGCCTTCACCCG AGTGCAGGACTTCCGCTATTTACAGCTCAGCAGCAGCATCGAGGAGAGGAAGAAGCGGGG AGAGACCAACAATGACCTGTTTCTGGCAGATGTGTTTTCCTACCAGGGGAAGTTCCACGA GGCCGCCAAACTGTATAAGAGGAGCGGGCATGAGAGCCTCGCACTCGACATGTACACGGA CCTGCGCATGTTTGAGTATGCCAAGGATTTCCTTGGATCTGGAGACCCCAAAGAAACAAG GATGCTGATCACCAAACAGGCCGACTGGGCCAGAAATATCAATGAGCCCAAAGCTGCTGT GGAGATGTACATCTCAGCAGGCGAGCACAGCAAGGCCATAGAGATCAGCGGTGACCATGG CTGGGTGGATACGCTCATCGACATTGCCCGGAAGCTGGACAAGGCGGAGCGGGAGCCCCT GCTGATGTGCGCTCACTACTTCAAGAAGCTGGACAACCCTGGCTATGCTGCTGAGACCTA CCTAAAGATAGGGGACCTGAAGTCCTTGGTTCAGCTGCATGTGGAGACCCAGCGCTGGGA TGAGGCCTTTGCTTTGGGGGAGAAGTATCCTGAATTTAAGGATGACATCTATGTGCCCTA TGCTCAGTGGCTGTGTTTCCGATTCCGTTTTGAGGAAGCCCAGAAAGCGTTCCACAAGGC CGGGCGGCAGGGGGAAGCAGTCCGGGTGCTGGAGCAGCTCACGCACAATGCTGTGGTAGA GAGCAGATTTAATGACGCTGCCTATTATTACTGGATGCTGTCCATGCAGTGCCTCGATAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 26-170, gnl|bosTau2|chr8 (40832460-40832604) | |
| 26-170, gnl|Hg17|chr3 (130689795-130689939) | |
| 26-170, gnl|Mm7|chr6 (115925149-115925293) | |
| 219-386, gnl|bosTau2|chr8 (40839114-40839281) | |
| 219-386, gnl|canFam2|chr20 (8670086-8669948) | |
| 219-386, gnl|dasNov1|scaffold_61300 (737-602) | |
| 219-386, gnl|echTel1|scaffold_313045 (84728-84593) | |
| 219-386, gnl|fr1|chrUn (73079207-73079348) | |
| 219-386, gnl|galGal2|chr12 (19412755-19412911) | |
| 219-386, gnl|hg17|chr3 (130590789-130590927) | |
| 219-386, gnl|Hg17|chr3 (130696982-130697149) | |
| 219-386, gnl|loxAfr1|scaffold_12459 (29951-30086) | |
| 219-386, gnl|mm7|chr6 (115931462-115931600) | |
| 219-386, gnl|Mm7|chr6 (115931463-115931630) | |
| 219-386, gnl|monDom2|scaffold_5 (40510803-40510939) | |
| 219-386, gnl|oryCun1|scaffold_207092 (36567-36432) | |
| 219-386, gnl|panTro1|chr2 (132643843-132643982) | |
| 219-386, gnl|rheMac2|chr11 (85445993-85445866) | |
| 219-386, gnl|rn3|chr4 (152277775-152277913) | |
| 219-386, gnl|tetNig1|chr9 (6692242-6692101) | |
| 219-386, gnl|xenTro1|scaffold_172 (1598950-1599086) | |
| 553-725, gnl|bosTau2|chr8 (40846272-40846444) | |
| 553-725, gnl|canFam2|chr20 (8662972-8662750) | |
| 553-725, gnl|dasNov1|scaffold_128171 (7041-7267) | |
| 553-725, gnl|echTel1|scaffold_313045 (77523-77296) | |
| 553-725, gnl|fr1|chrUn (73080596-73080789) | |
| 553-725, gnl|galGal2|chr12 (19416749-19416942) | |
| 553-725, gnl|hg17|chr3 (130704225-130704448) | |
| 553-725, gnl|Hg17|chr3 (130704252-130704424) | |
| 553-725, gnl|mm7|chr6 (115938084-115938293) | |
| 553-725, gnl|Mm7|chr6 (115938104-115938276) | |
| 553-725, gnl|monDom2|scaffold_5 (40523330-40523542) | |
| 553-725, gnl|oryCun1|scaffold_213711 (22393-22169) | |
| 553-725, gnl|panTro1|chr2 (132760357-132760581) | |
| 553-725, gnl|rheMac2|chr11 (85314641-85314418) | |
| 553-725, gnl|rn3|chr4 (152284297-152284514) | |
| 553-725, gnl|tetNig1|chr9 (6690808-6690620) | |
| 553-725, gnl|xenTro1|scaffold_172 (1604500-1604685) | |
| 826-960, gnl|bosTau2|chr8 (40850031-40850165) | |
| 826-960, gnl|Hg17|chr3 (130707948-130708082) | |
| 826-960, gnl|Mm7|chr6 (115941578-115941712) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 26-170, gnl|bosTau2|chr8 (40832460-40832604) | |
| 26-170, gnl|Hg17|chr3 (130689795-130689939) | |
| 26-170, gnl|Mm7|chr6 (115925149-115925293) | |
| 219-386, gnl|bosTau2|chr8 (40839114-40839281) | |
| 219-386, gnl|canFam2|chr20 (8670086-8669948) | |
| 219-386, gnl|dasNov1|scaffold_61300 (737-602) | |
| 219-386, gnl|echTel1|scaffold_313045 (84728-84593) | |
| 219-386, gnl|fr1|chrUn (73079207-73079348) | |
| 219-386, gnl|galGal2|chr12 (19412755-19412911) | |
| 219-386, gnl|hg17|chr3 (130590789-130590927) | |
| 219-386, gnl|Hg17|chr3 (130696982-130697149) | |
| 219-386, gnl|loxAfr1|scaffold_12459 (29951-30086) | |
| 219-386, gnl|mm7|chr6 (115931462-115931600) | |
| 219-386, gnl|Mm7|chr6 (115931463-115931630) | |
| 219-386, gnl|monDom2|scaffold_5 (40510803-40510939) | |
| 219-386, gnl|oryCun1|scaffold_207092 (36567-36432) | |
| 219-386, gnl|panTro1|chr2 (132643843-132643982) | |
| 219-386, gnl|rheMac2|chr11 (85445993-85445866) | |
| 219-386, gnl|rn3|chr4 (152277775-152277913) | |
| 219-386, gnl|tetNig1|chr9 (6692242-6692101) | |
| 219-386, gnl|xenTro1|scaffold_172 (1598950-1599086) | |
| 553-725, gnl|bosTau2|chr8 (40846272-40846444) | |
| 553-725, gnl|canFam2|chr20 (8662972-8662750) | |
| 553-725, gnl|dasNov1|scaffold_128171 (7041-7267) | |
| 553-725, gnl|echTel1|scaffold_313045 (77523-77296) | |
| 553-725, gnl|fr1|chrUn (73080596-73080789) | |
| 553-725, gnl|galGal2|chr12 (19416749-19416942) | |
| 553-725, gnl|hg17|chr3 (130704225-130704448) | |
| 553-725, gnl|Hg17|chr3 (130704252-130704424) | |
| 553-725, gnl|mm7|chr6 (115938084-115938293) | |
| 553-725, gnl|Mm7|chr6 (115938104-115938276) | |
| 553-725, gnl|monDom2|scaffold_5 (40523330-40523542) | |
| 553-725, gnl|oryCun1|scaffold_213711 (22393-22169) | |
| 553-725, gnl|panTro1|chr2 (132760357-132760581) | |
| 553-725, gnl|rheMac2|chr11 (85314641-85314418) | |
| 553-725, gnl|rn3|chr4 (152284297-152284514) | |
| 553-725, gnl|tetNig1|chr9 (6690808-6690620) | |
| 553-725, gnl|xenTro1|scaffold_172 (1604500-1604685) | |
| 826-960, gnl|bosTau2|chr8 (40850031-40850165) | |
| 826-960, gnl|Hg17|chr3 (130707948-130708082) | |
| 826-960, gnl|Mm7|chr6 (115941578-115941712) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hea (0.204499) | |
| lnt (0.142308) |