Non-Coding RNA Search

Ss1.1-Pig2-83K13.5

Sequence:


               
               GTTACAACGAGCCAGATGACTATTCCATGGAATGGAATTTGGTCATGGAGAAGCTAAAGC
GCTGTGGAGTGAAGAACTACACAGGATTTTTCCGGTTCCTCCTTTGAAAGGACGACTGGC
CACACCTACCCCAGGGGCTGCTGTAAGTCCATCGGGACCATGGCCTGTGATGGGCGCAAG
GTGTCCACAAATGTCATCCACCAGGAGCTGCCAGGAGTTCTTGCCACCGTGCTGCTGTTC
ATCAAGCTGGGCTGACAGACGTGGGGAGAACAGGACCCCCAGGGCCTGGCTGGCTGCTGG
AGCTGTGGTCTCAATTTGCTTCTCTATGGAACTCACTGCTTCTGGAAGGGAGATAGATAA
TAAAAGATTTGGGAAATCTCCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTACAACGAGCCAGATGACTATTCCATGGAATGGAATTTGGTCATGGAGAAGCTAAAGC
GCTGTGGAGTGAAGAACTACACAGGATTTTTCCGGTTCCTCCTTTGAAAGGACGACTGGC
CACACCTACCCCAGGGGCTGCTGTAAGTCCATCGGGACCATGGCCTGTGATGGGCGCAAG
GTGTCCACAAATGTCATCCACCAGGAGCTGCCAGGAGTTCTTGCCACCGTGCTGCTGTTC
ATCAAGCTGGGCTGACAGACGTGGGGAGAACAGGACCCCCAGGGCCTGGCTGGCTGCTGG
AGCTGTGGTCTCAATTTGCTTCTCTATGGAACTCACTGCTTCTGGAAGGGAGATAGATAA
TAAAAGATTTGGGAAATCTCCTCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               206-383, gnl|bosTau2|chr7 (11183714-11183891)
               

               
               206-383, gnl|Hg17|chr19 (11287465-11287648)
               

               
               206-383, gnl|Mm7|chr9 (21780548-21780727)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               206-383, gnl|bosTau2|chr7 (11183714-11183891)
               

               
               206-383, gnl|Hg17|chr19 (11287465-11287648)
               

               
               206-383, gnl|Mm7|chr9 (21780548-21780727)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	206-383, gnl\|bosTau2\|chr7 (11183714-11183891)
	206-383, gnl\|Hg17\|chr19 (11287465-11287648)
	206-383, gnl\|Mm7\|chr9 (21780548-21780727)