Ss1.1-Pig2-83P08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCTGGAGGGGGGCTGGGATCTGCTCATGACCTCGGCAGGGCACGAACGAGAAGCCTGG GGGCTGGCCATCGCCATGGCAAAGTTCGCCGGCCCCCGGCTGCCCTTGGTGACGAAGGCG CTGTTCAGCACGCAGAGCAGCGTGTACGACATCCAGAGGGTCACCTCCACAGCTTTCCTG GCCGAGCTGCTCAGCAGCAACGTGGTGAGGGACCTGATGCTCTTGGAGTCGCTGCTGGAC AACCTGGCAGCGCGGCAGAAGGACAGCTGCGCGAGCGTGCGGCGGCTGGTGCTCCGGGGT CTGGCCAACGTGGCCACCGGCTCCCCCGACAAGGTGCGGGCCCACGGCCCCCAGCTCCTG ACGGCCATGATCGGAGGGCTGGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCTGGAGGGGGGCTGGGATCTGCTCATGACCTCGGCAGGGCACGAACGAGAAGCCTGG GGGCTGGCCATCGCCATGGCAAAGTTCGCCGGCCCCCGGCTGCCCTTGGTGACGAAGGCG CTGTTCAGCACGCAGAGCAGCGTGTACGACATCCAGAGGGTCACCTCCACAGCTTTCCTG GCCGAGCTGCTCAGCAGCAACGTGGTGAGGGACCTGATGCTCTTGGAGTCGCTGCTGGAC AACCTGGCAGCGCGGCAGAAGGACAGCTGCGCGAGCGTGCGGCGGCTGGTGCTCCGGGGT CTGGCCAACGTGGCCACCGGCTCCCCCGACAAGGTGCGGGCCCACGGCCCCCAGCTCCTG ACGGCCATGATCGGAGGGCTGGAC |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 182-336, gnl|bosTau2|chr14 (57637-57483) | |
| 182-336, gnl|canFam2|chr13 (40727122-40727277) | |
| 182-336, gnl|canFam2|chr13 (40727122-40727277) | |
| 182-336, gnl|dasNov1|scaffold_238156 (677-521) | |
| 182-336, gnl|dasNov1|scaffold_238156 (677-521) | |
| 182-336, gnl|echTel1|scaffold_183882 (5143-5300) | |
| 182-336, gnl|echTel1|scaffold_183882 (5143-5300) | |
| 182-336, gnl|fr1|chrUn (119771493-119771329) | |
| 182-336, gnl|fr1|chrUn (119771493-119771329) | |
| 182-336, gnl|hg17|chr8 (145454671-145454838) | |
| 182-336, gnl|hg17|chr8 (145386798-145386965) | |
| 182-336, gnl|Hg17|chr8 (145454670-145454824) | |
| 182-336, gnl|loxAfr1|scaffold_50647 (7114-6947) | |
| 182-336, gnl|loxAfr1|scaffold_50647 (7114-6947) | |
| 182-336, gnl|mm7|chr15 (76533611-76533771) | |
| 182-336, gnl|mm7|chr15 (76533611-76533771) | |
| 182-336, gnl|Mm7|chr15 (76533610-76533764) | |
| 182-336, gnl|monDom2|scaffold_79 (2729745-2729908) | |
| 182-336, gnl|monDom2|scaffold_79 (2729745-2729908) | |
| 182-336, gnl|panTro1|chr7_random (13810148-13809982) | |
| 182-336, gnl|panTro1|chr7_random (13810148-13809982) | |
| 182-336, gnl|rheMac2|chr8 (146881055-146881222) | |
| 182-336, gnl|rheMac2|chr8 (146881055-146881222) | |
| 182-336, gnl|rn3|chr7 (114532463-114532623) | |
| 182-336, gnl|rn3|chr7 (114532463-114532623) | |
| 182-336, gnl|tetNig1|chr8 (3166816-3166983) | |
| 182-336, gnl|tetNig1|chr8 (3166816-3166983) | |
| 182-336, gnl|xenTro1|scaffold_1404 (83505-83662) | |
| 182-336, gnl|xenTro1|scaffold_1404 (83505-83662) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 182-336, gnl|bosTau2|chr14 (57637-57483) | |
| 182-336, gnl|canFam2|chr13 (40727122-40727277) | |
| 182-336, gnl|canFam2|chr13 (40727122-40727277) | |
| 182-336, gnl|dasNov1|scaffold_238156 (677-521) | |
| 182-336, gnl|dasNov1|scaffold_238156 (677-521) | |
| 182-336, gnl|echTel1|scaffold_183882 (5143-5300) | |
| 182-336, gnl|echTel1|scaffold_183882 (5143-5300) | |
| 182-336, gnl|fr1|chrUn (119771493-119771329) | |
| 182-336, gnl|fr1|chrUn (119771493-119771329) | |
| 182-336, gnl|hg17|chr8 (145454671-145454838) | |
| 182-336, gnl|hg17|chr8 (145386798-145386965) | |
| 182-336, gnl|Hg17|chr8 (145454670-145454824) | |
| 182-336, gnl|loxAfr1|scaffold_50647 (7114-6947) | |
| 182-336, gnl|loxAfr1|scaffold_50647 (7114-6947) | |
| 182-336, gnl|mm7|chr15 (76533611-76533771) | |
| 182-336, gnl|mm7|chr15 (76533611-76533771) | |
| 182-336, gnl|Mm7|chr15 (76533610-76533764) | |
| 182-336, gnl|monDom2|scaffold_79 (2729745-2729908) | |
| 182-336, gnl|monDom2|scaffold_79 (2729745-2729908) | |
| 182-336, gnl|panTro1|chr7_random (13810148-13809982) | |
| 182-336, gnl|panTro1|chr7_random (13810148-13809982) | |
| 182-336, gnl|rheMac2|chr8 (146881055-146881222) | |
| 182-336, gnl|rheMac2|chr8 (146881055-146881222) | |
| 182-336, gnl|rn3|chr7 (114532463-114532623) | |
| 182-336, gnl|rn3|chr7 (114532463-114532623) | |
| 182-336, gnl|tetNig1|chr8 (3166816-3166983) | |
| 182-336, gnl|tetNig1|chr8 (3166816-3166983) | |
| 182-336, gnl|xenTro1|scaffold_1404 (83505-83662) | |
| 182-336, gnl|xenTro1|scaffold_1404 (83505-83662) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nco (0.161734) | |
| med (0.116252) |