Ss1.1-Pig2-85D21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCCTGCTCAAACGCCACCCCTGTGAGGACGTCTTTGGTGTCCAGCTTGAGGGCGCCTT CCCCGACACCATGACCAAGTGTGCAGAGCTGCTGAACCGCACCATCGAGGTGGATTTCGT GGACATCAACGTCGGCTGCCCCATCGATCTCGTATACAAGAAGGGCGGGGGCTGTGCCCT CATGAACCGCTCGGCTAAGTTCCAGCAGATCGTCCGAGGCATGAACCAGGTGCTGGACGT GCCCCTGACCGTGAAGATCCGCACAGGCGTCCAGGAGCGTGTGAATCTGGCCCACCGGCT GCTGCCTGAGCTGCGGGACTGGGGGGCAGCTCTAGTCACGCCCGTCTCTCCCGGTCTCTC TGGATCTCTTTCTCTCTGTCTTTGTCTGATCCTCCACCTTCCCGAACCCTTCCTCCCTCC CTCCCCATGCGGCTGCCTCTTCTCCAGCTCCATGGCCGCTCTCGGGAGCAGCGCTACACC AAGCTGGCCGACTGGCAGTACATCGAGCAGTGCGTGACAGCAGCCAGCCCCATGCCCCTC TTCGGAAACGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCCTGCTCAAACGCCACCCCTGTGAGGACGTCTTTGGTGTCCAGCTTGAGGGCGCCTT CCCCGACACCATGACCAAGTGTGCAGAGCTGCTGAACCGCACCATCGAGGTGGATTTCGT GGACATCAACGTCGGCTGCCCCATCGATCTCGTATACAAGAAGGGCGGGGGCTGTGCCCT CATGAACCGCTCGGCTAAGTTCCAGCAGATCGTCCGAGGCATGAACCAGGTGCTGGACGT GCCCCTGACCGTGAAGATCCGCACAGGCGTCCAGGAGCGTGTGAATCTGGCCCACCGGCT GCTGCCTGAGCTGCGGGACTGGGGGGCAGCTCTAGTCACGCCCGTCTCTCCCGGTCTCTC TGGATCTCTTTCTCTCTGTCTTTGTCTGATCCTCCACCTTCCCGAACCCTTCCTCCCTCC CTCCCCATGCGGCTGCCTCTTCTCCAGCTCCATGGCCGCTCTCGGGAGCAGCGCTACACC AAGCTGGCCGACTGGCAGTACATCGAGCAGTGCGTGACAGCAGCCAGCCCCATGCCCCTC TTCGGAAACGGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 44-164, gnl|bosTau2|chr7 (13273573-13273693) | |
| 44-164, gnl|canFam2|chr20 (57198593-57198470) | |
| 44-164, gnl|danRer3|chrNA (172039543-172039419) | |
| 44-164, gnl|fr1|chrUn (209556774-209556902) | |
| 44-164, gnl|galGal2|chr28 (1892975-1893103) | |
| 44-164, gnl|hg17|chr19 (5738598-5738726) | |
| 44-164, gnl|Hg17|chr19 (5738719-5738599) | |
| 44-164, gnl|loxAfr1|scaffold_208688 (943-1066) | |
| 44-164, gnl|mm7|chr17 (54979284-54979161) | |
| 44-164, gnl|Mm7|chr17 (54979161-54979281) | |
| 44-164, gnl|monDom2|scaffold_85 (3678931-3679054) | |
| 44-164, gnl|panTro1|chr20 (6065489-6065617) | |
| 44-164, gnl|rn3|chrUn (25014324-25014447) | |
| 44-164, gnl|tetNig1|chr21_random (1930352-1930227) | |
| 44-164, gnl|xenTro1|scaffold_182 (942256-942133) | |
| 227-340, gnl|bosTau2|chr7 (13274002-13274115) | |
| 227-340, gnl|canFam2|chr20 (57199104-57198944) | |
| 227-340, gnl|danRer3|chrNA (172040535-172040412) | |
| 227-340, gnl|fr1|chrUn (209556047-209556188) | |
| 227-340, gnl|galGal2|chr28 (1892372-1892526) | |
| 227-340, gnl|hg17|chr19 (5738040-5738204) | |
| 227-340, gnl|Hg17|chr19 (5738185-5738072) | |
| 227-340, gnl|loxAfr1|scaffold_208688 (393-553) | |
| 227-340, gnl|mm7|chr17 (54979793-54979628) | |
| 227-340, gnl|Mm7|chr17 (54979645-54979758) | |
| 227-340, gnl|monDom2|scaffold_85 (3677218-3677358) | |
| 227-340, gnl|rn3|chrUn (25013862-25014027) | |
| 227-340, gnl|tetNig1|chr21_random (1931092-1930970) | |
| 227-340, gnl|xenTro1|scaffold_182 (946004-945885) | |
| 342-545, gnl|bosTau2|chr7 (13274262-13274459) | |
| 342-545, gnl|Hg17|chr19 (5737927-5737759) | |
| 342-545, gnl|Mm7|chr17 (54979866-54980033) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 44-164, gnl|bosTau2|chr7 (13273573-13273693) | |
| 44-164, gnl|canFam2|chr20 (57198593-57198470) | |
| 44-164, gnl|danRer3|chrNA (172039543-172039419) | |
| 44-164, gnl|fr1|chrUn (209556774-209556902) | |
| 44-164, gnl|galGal2|chr28 (1892975-1893103) | |
| 44-164, gnl|hg17|chr19 (5738598-5738726) | |
| 44-164, gnl|Hg17|chr19 (5738719-5738599) | |
| 44-164, gnl|loxAfr1|scaffold_208688 (943-1066) | |
| 44-164, gnl|mm7|chr17 (54979284-54979161) | |
| 44-164, gnl|Mm7|chr17 (54979161-54979281) | |
| 44-164, gnl|monDom2|scaffold_85 (3678931-3679054) | |
| 44-164, gnl|panTro1|chr20 (6065489-6065617) | |
| 44-164, gnl|rn3|chrUn (25014324-25014447) | |
| 44-164, gnl|tetNig1|chr21_random (1930352-1930227) | |
| 44-164, gnl|xenTro1|scaffold_182 (942256-942133) | |
| 227-340, gnl|bosTau2|chr7 (13274002-13274115) | |
| 227-340, gnl|canFam2|chr20 (57199104-57198944) | |
| 227-340, gnl|danRer3|chrNA (172040535-172040412) | |
| 227-340, gnl|fr1|chrUn (209556047-209556188) | |
| 227-340, gnl|galGal2|chr28 (1892372-1892526) | |
| 227-340, gnl|hg17|chr19 (5738040-5738204) | |
| 227-340, gnl|Hg17|chr19 (5738185-5738072) | |
| 227-340, gnl|loxAfr1|scaffold_208688 (393-553) | |
| 227-340, gnl|mm7|chr17 (54979793-54979628) | |
| 227-340, gnl|Mm7|chr17 (54979645-54979758) | |
| 227-340, gnl|monDom2|scaffold_85 (3677218-3677358) | |
| 227-340, gnl|rn3|chrUn (25013862-25014027) | |
| 227-340, gnl|tetNig1|chr21_random (1931092-1930970) | |
| 227-340, gnl|xenTro1|scaffold_182 (946004-945885) | |
| 342-545, gnl|bosTau2|chr7 (13274262-13274459) | |
| 342-545, gnl|Hg17|chr19 (5737927-5737759) | |
| 342-545, gnl|Mm7|chr17 (54979866-54980033) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) |