Non-Coding RNA Search

Ss1.1-Pig2-85L08.5

Sequence:


               
               AGCAGAGACTGGAGAAAGGCTGAGGATGTTGGACAATCCTGATGGGAAGGAAAAGCAGAC
CAACACTGTAGGCTGAAAATTACCTGCCTCCTCTACTTCAAAGATAACAAGCCACTGAGG
GCACTTTTCTAGGAAGAAAAAACTAGCACCCAAGTTATGTTGACTTACTAAGCAGGACAC
TCTCTATTTGCTCTCCCATTTGTGAGGGGATTTACATGTGAAACCTCCCCCAGTGCTAAT
GGGAGTCCTTATCCAACTCAATCCTCTCTGCTACAGAGGATAGGATGACCGCCAATGAAA
TAGGAAGCTCAGGTTATCTAATATAAAAATCTCTTGGAATTAGCACTTCCCAGTGTTCAA
AGATCTATGTAATAGAATTGATTTCCACATTTTCTTCTCATTTTGAAATCTGAATGTTTA
ATCCAAGCTTGCCAGGGGCAATGACCTTGTGGAGAAACTGGCTTCCCTATGTCTTCTGGA
AAAACAGAGTCATACAATCTCCCCCCCCCACCCCCCGATTTGGTGAATGTAGAAATACTA
CTGCTGTTGTTATGAAAAGAATAGTTTCTTAACAACATGGTTTGAAAATGAACCAAACTA
AATTATTTTCTGTTCCTATAAATTGGGTTTATTTTTCATAAACAAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAGAGACTGGAGAAAGGCTGAGGATGTTGGACAATCCTGATGGGAAGGAAAAGCAGAC
CAACACTGTAGGCTGAAAATTACCTGCCTCCTCTACTTCAAAGATAACAAGCCACTGAGG
GCACTTTTCTAGGAAGAAAAAACTAGCACCCAAGTTATGTTGACTTACTAAGCAGGACAC
TCTCTATTTGCTCTCCCATTTGTGAGGGGATTTACATGTGAAACCTCCCCCAGTGCTAAT
GGGAGTCCTTATCCAACTCAATCCTCTCTGCTACAGAGGATAGGATGACCGCCAATGAAA
TAGGAAGCTCAGGTTATCTAATATAAAAATCTCTTGGAATTAGCACTTCCCAGTGTTCAA
AGATCTATGTAATAGAATTGATTTCCACATTTTCTTCTCATTTTGAAATCTGAATGTTTA
ATCCAAGCTTGCCAGGGGCAATGACCTTGTGGAGAAACTGGCTTCCCTATGTCTTCTGGA
AAAACAGAGTCATACAATCTCCCCCCCCCACCCCCCGATTTGGTGAATGTAGAAATACTA
CTGCTGTTGTTATGAAAAGAATAGTTTCTTAACAACATGGTTTGAAAATGAACCAAACTA
AATTATTTTCTGTTCCTATAAATTGGGTTTATTTTTCATAAACAAGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-545, gnl|bosTau2|chr8 (47043322-47043871)
               

               
               1-545, gnl|Hg17|chr9 (38684849-38684294)
               

               
               1-545, gnl|Mm7|chr13 (62313077-62312562)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-545, gnl|bosTau2|chr8 (47043322-47043871)
               

               
               1-545, gnl|Hg17|chr9 (38684849-38684294)
               

               
               1-545, gnl|Mm7|chr13 (62313077-62312562)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bla (0.124347)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)

	1-545, gnl\|bosTau2\|chr8 (47043322-47043871)
	1-545, gnl\|Hg17\|chr9 (38684849-38684294)
	1-545, gnl\|Mm7\|chr13 (62313077-62312562)