Ss1.1-Pig2-85O21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTTATTTTGGGGGGAGGGTAAGGGGGATTGCCCCCTTCCTTTTGGCCCTCCTCCCCCG CAGGCTTCTGTGTGCTGCTAAACGTATTTATTGTGATGCCTTGGTCAGGGCCCCTCTATC CCCCTCCTCGTGCTGTGTGGAGTGGACACCCTTAATCCCAAAGCGGGGAGGGCCGCTGTG GCCTTGGGGGGCTCTGTTGCCACCCTGTTCTCCCACGTTTCTCTTTCTTTCCCTCTCCCC CTCTCTCCCTCCCTTTCCCCCCACCTCCACCTCCATTCCTCGCCTTTCCCCTGCTGTGCC CGCTAGCCCGCCTCGGTGTCTATGCAAGGCCGCTTCGCCATTGCGGTATTCCTGTCCCCC TCCCCCAGAAGTCCCGCCTCGTTCCCTGTGAACCCTTATAATCCTAATAAAATACTGAGC AAATTCAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTTATTTTGGGGGGAGGGTAAGGGGGATTGCCCCCTTCCTTTTGGCCCTCCTCCCCCG CAGGCTTCTGTGTGCTGCTAAACGTATTTATTGTGATGCCTTGGTCAGGGCCCCTCTATC CCCCTCCTCGTGCTGTGTGGAGTGGACACCCTTAATCCCAAAGCGGGGAGGGCCGCTGTG GCCTTGGGGGGCTCTGTTGCCACCCTGTTCTCCCACGTTTCTCTTTCTTTCCCTCTCCCC CTCTCTCCCTCCCTTTCCCCCCACCTCCACCTCCATTCCTCGCCTTTCCCCTGCTGTGCC CGCTAGCCCGCCTCGGTGTCTATGCAAGGCCGCTTCGCCATTGCGGTATTCCTGTCCCCC TCCCCCAGAAGTCCCGCCTCGTTCCCTGTGAACCCTTATAATCCTAATAAAATACTGAGC AAATTCAAAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1-119, + strand, RNAz p=0.992257 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, + strand, RNAz p=0.992257 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC024270, + |
| Aligned organism(s): 6 entry(ies) | More info |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
| 1-243, gnl|bosTau2|chr25 (14027165-14026927) | |
| 1-243, gnl|Hg17|chrX (53000305-53000589) | |
| 1-243, gnl|Mm7|chrX (147095932-147095669) | |
| 270-429, gnl|bosTau2|chr25 (14026938-14026780) | |
| 270-429, gnl|Hg17|chrX (53000578-53000745) | |
| 270-429, gnl|Mm7|chrX (147095680-147095531) |
| Aligned organism(s): 6 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-243, gnl|bosTau2|chr25 (14027165-14026927) | |
| 1-243, gnl|Hg17|chrX (53000305-53000589) | |
| 1-243, gnl|Mm7|chrX (147095932-147095669) | |
| 270-429, gnl|bosTau2|chr25 (14026938-14026780) | |
| 270-429, gnl|Hg17|chrX (53000578-53000745) | |
| 270-429, gnl|Mm7|chrX (147095680-147095531) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| fhi (0.339155) | |
| ece (0.229305) | |
| fcc (0.197785) | |
| eye (0.170503) | |
| ebs (0.118301) | |
| jca (0.11396) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fhi (0.339155) | |
| ece (0.229305) | |
| fcc (0.197785) | |
| eye (0.170503) | |
| ebs (0.118301) | |
| jca (0.11396) |