Non-Coding RNA Search

Ss1.1-Pig2-85P12.5

Sequence:


               
               GTGAGGCTACTCTATCGCCGCACCATGGACTCACGCCTCGAAGATATGAGCTCAACGGCG
ACCTGCGTCCGGTCTCGCCCAGCTCCCCAGACGCCTCGCCACCCCGCTGGGGCAGGAACC
GCCCCATCAACATGAACCATTATGCCAATAAGAAGAGCGCGGCTGAGAGCATGCTGGACA
TCGCACTGCTGATGGCCAATGCCTCCCAGCTGAAGGCTGTCATCGAGCAGGGCCCCAGCT
TCGCCTTCTTCATCCCCCTGGTGGTCCTCATCTCCATCTCGCTCGTGCTGCAGGTTGGCG
TGGGCGTGCTGCTCATCTTCCTTGTCAGGTACGACCTCAACAACCCTGCCAAGCATGCCA
AGCTGGACTTCCTCAACAATCTGGCCACCGGCCTGGTTTTCATCATCGTCGTGGTCAACA
TCTTCATCACTGCCTTCGGCGTCCAGAAGCCCATGATGGATGTGGCGCCCCGGCAGTAGG
AGCTCAGATGCCCCTGGATTGTGCCTTGCCCTCGAGGCCAACCTGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGGCTACTCTATCGCCGCACCATGGACTCACGCCTCGAAGATATGAGCTCAACGGCG
ACCTGCGTCCGGTCTCGCCCAGCTCCCCAGACGCCTCGCCACCCCGCTGGGGCAGGAACC
GCCCCATCAACATGAACCATTATGCCAATAAGAAGAGCGCGGCTGAGAGCATGCTGGACA
TCGCACTGCTGATGGCCAATGCCTCCCAGCTGAAGGCTGTCATCGAGCAGGGCCCCAGCT
TCGCCTTCTTCATCCCCCTGGTGGTCCTCATCTCCATCTCGCTCGTGCTGCAGGTTGGCG
TGGGCGTGCTGCTCATCTTCCTTGTCAGGTACGACCTCAACAACCCTGCCAAGCATGCCA
AGCTGGACTTCCTCAACAATCTGGCCACCGGCCTGGTTTTCATCATCGTCGTGGTCAACA
TCTTCATCACTGCCTTCGGCGTCCAGAAGCCCATGATGGATGTGGCGCCCCGGCAGTAGG
AGCTCAGATGCCCCTGGATTGTGCCTTGCCCTCGAGGCCAACCTGCTA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               NINJ1_RAT

Coded protein: 1 entry(ies)

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Protein identifier


               
               NINJ1_RAT

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               17-510, gnl|bosTau2|chr2 (55347538-55347044)
               

               
               17-510, gnl|Hg17|chr9 (92968476-92964047)
               


               
               272-459, gnl|bosTau2|chr20 (30128303-30128488)
               

               
               272-459, gnl|Hg17|chr9 (92968299-92966765)
               

               
               272-459, gnl|Mm7|chr13 (48678732-48678905)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-510, gnl|bosTau2|chr2 (55347538-55347044)
               

               
               17-510, gnl|Hg17|chr9 (92968476-92964047)
               


               
               272-459, gnl|bosTau2|chr20 (30128303-30128488)
               

               
               272-459, gnl|Hg17|chr9 (92968299-92966765)
               

               
               272-459, gnl|Mm7|chr13 (48678732-48678905)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nep (0.183925)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)

	17-510, gnl\|bosTau2\|chr2 (55347538-55347044)
	17-510, gnl\|Hg17\|chr9 (92968476-92964047)

	272-459, gnl\|bosTau2\|chr20 (30128303-30128488)
	272-459, gnl\|Hg17\|chr9 (92968299-92966765)
	272-459, gnl\|Mm7\|chr13 (48678732-48678905)