Non-Coding RNA Search

Ss1.1-Pig2-87O18.5

Sequence:


               
               GCCCTCACTGGAGCGGCTCCACCTGCAGAACAACATCATTTCCAAGGTGCCCCGAGGAGC
CCTGAGCCGTCAGACCCACCTCCGTGAGCTATACCTTCAGCACAACCAGCTGACGGACAG
CGGCCTGGATGCCACCACGTTCAGCAAGCTGCACCGCCTCGAGTACCTGGACCTGTCCCA
CAACCAGTTGGCCACAGTGCCTGCTGGCCTGCCCCACACCCTGGCTGTTCTGCATCTGGG
CCGCAACCGCATCCGCTGGGTGGAGGCGGCCCGGCTGCGTGGCATGCGGGGCCTGCGCTA
CTTGCTGCTGCAGCACAACCAGCTGGGAGCGACGGGGCTGCCAGCCAGGGCGCTGAGGCC
GCTGCGGGGTCTGCACACGCTGCATCTCTATGGCAATGGGCTGGACCGCATGCCACAGGC
GCTGCCCCGTCACCTACGGTCCCTGGTGCTGCCCCACAACCATGTGACCATGTTGGGTGC
CCGTGACCTGGCCGCCACACCTGGCCTGGCTGAGCTCAACCTGGCCTACAACCACCTGGC
CAGTGCCCGTGTGCACCGCCGGGCCTTTCGCCGGTTGCGTGCCCTACGCAGCCTGGACTT
GGCTGGCAACCAGCTGACCCAGCTGCCTGCTGGCCTGCCTGCCAGCCTGAACACCCTGCG
GCTGCAGCGAAACCAGCTGAGAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCTCACTGGAGCGGCTCCACCTGCAGAACAACATCATTTCCAAGGTGCCCCGAGGAGC
CCTGAGCCGTCAGACCCACCTCCGTGAGCTATACCTTCAGCACAACCAGCTGACGGACAG
CGGCCTGGATGCCACCACGTTCAGCAAGCTGCACCGCCTCGAGTACCTGGACCTGTCCCA
CAACCAGTTGGCCACAGTGCCTGCTGGCCTGCCCCACACCCTGGCTGTTCTGCATCTGGG
CCGCAACCGCATCCGCTGGGTGGAGGCGGCCCGGCTGCGTGGCATGCGGGGCCTGCGCTA
CTTGCTGCTGCAGCACAACCAGCTGGGAGCGACGGGGCTGCCAGCCAGGGCGCTGAGGCC
GCTGCGGGGTCTGCACACGCTGCATCTCTATGGCAATGGGCTGGACCGCATGCCACAGGC
GCTGCCCCGTCACCTACGGTCCCTGGTGCTGCCCCACAACCATGTGACCATGTTGGGTGC
CCGTGACCTGGCCGCCACACCTGGCCTGGCTGAGCTCAACCTGGCCTACAACCACCTGGC
CAGTGCCCGTGTGCACCGCCGGGCCTTTCGCCGGTTGCGTGCCCTACGCAGCCTGGACTT
GGCTGGCAACCAGCTGACCCAGCTGCCTGCTGGCCTGCCTGCCAGCCTGAACACCCTGCG
GCTGCAGCGAAACCAGCTGAGAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10440139|dbj|BAB15657.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10440139|dbj|BAB15657.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               142-679, gnl|bosTau2|chr12 (48548636-48548099)
               

               
               142-679, gnl|Hg17|chr1 (53256055-53256592)
               

               
               142-679, gnl|Mm7|chr4 (107398253-107397716)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               142-679, gnl|bosTau2|chr12 (48548636-48548099)
               

               
               142-679, gnl|Hg17|chr1 (53256055-53256592)
               

               
               142-679, gnl|Mm7|chr4 (107398253-107397716)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	142-679, gnl\|bosTau2\|chr12 (48548636-48548099)
	142-679, gnl\|Hg17\|chr1 (53256055-53256592)
	142-679, gnl\|Mm7\|chr4 (107398253-107397716)