Ss1.1-Pig2-88M10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCCCAGAGGGGAGAGATGGGTCATTTCCTCTCTGGCTATTTGCACCCTCCCTTGGAGCT TTAAAAACCACAGCCCTCAGGCAGGAGGGACCTCTGATCAGCGAGTGGAGAACCTCGGAG GGACCAGAATATGGACCCCATGGTTGATAACACCACTGATTACTACAATTATGGCTGGAC CCTGCTCCCTGGCCAACCGGTGGATGCCTCTTCCAGAACCCTCAAGCTGCACGCTCCCGA CGTGATTGCCCTGGTGATCTTTGTCATTGTCTTCCTGGTGGGAGTGCCGGGCAATGCCCT GGTGGTCTGGGTGACGGGATCCGAGGCCAAGCGGACCATCAACGCCATCTGGTTTCTCAA CCTGGCGGTGGCTGACCTCCTCTCCTGCCTGGCGCTGCCCATCTTGTTTGCATCCATCTT GCAGCACAACCACTGGTCCTTCGGGGACGCCGCCTGCCGAATCCTGCCCTCGCTCATCCT GCTCAACATGTACGCCAGCATCTTGCTCCTGGCTACCATCAGCGCCGACCGCTTCCTGCT GGTGTTTAACCCCGTTTGGTGCCAGAACTTCCGANAGGCCCACCTGGCCTGGATGGCCTG TGGCATGGCCTGGGGCCTGGCTCTGCTGCTGACCATACCTTCCTTCCTGTTCCGAACGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCCCAGAGGGGAGAGATGGGTCATTTCCTCTCTGGCTATTTGCACCCTCCCTTGGAGCT TTAAAAACCACAGCCCTCAGGCAGGAGGGACCTCTGATCAGCGAGTGGAGAACCTCGGAG GGACCAGAATATGGACCCCATGGTTGATAACACCACTGATTACTACAATTATGGCTGGAC CCTGCTCCCTGGCCAACCGGTGGATGCCTCTTCCAGAACCCTCAAGCTGCACGCTCCCGA CGTGATTGCCCTGGTGATCTTTGTCATTGTCTTCCTGGTGGGAGTGCCGGGCAATGCCCT GGTGGTCTGGGTGACGGGATCCGAGGCCAAGCGGACCATCAACGCCATCTGGTTTCTCAA CCTGGCGGTGGCTGACCTCCTCTCCTGCCTGGCGCTGCCCATCTTGTTTGCATCCATCTT GCAGCACAACCACTGGTCCTTCGGGGACGCCGCCTGCCGAATCCTGCCCTCGCTCATCCT GCTCAACATGTACGCCAGCATCTTGCTCCTGGCTACCATCAGCGCCGACCGCTTCCTGCT GGTGTTTAACCCCGTTTGGTGCCAGAACTTCCGANAGGCCCACCTGGCCTGGATGGCCTG TGGCATGGCCTGGGGCCTGGCTCTGCTGCTGACCATACCTTCCTTCCTGTTCCGAACGGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 270-654, gnl|bosTau2|chr17 (40466010-40466394) | |
| 270-654, gnl|canFam2|chr26 (21561178-21560753) | |
| 270-654, gnl|danRer3|chr5 (10790334-10789914) | |
| 270-654, gnl|dasNov1|scaffold_15473 (9651-10079) | |
| 270-654, gnl|echTel1|scaffold_169732 (1156-727) | |
| 270-654, gnl|fr1|chrUn (1921458-1921023) | |
| 270-654, gnl|galGal2|chr15 (6451849-6452272) | |
| 270-654, gnl|hg17|chr12 (107188658-107189083) | |
| 270-654, gnl|Hg17|chr12 (107189058-107188674) | |
| 270-654, gnl|loxAfr1|scaffold_72848 (3748-3323) | |
| 270-654, gnl|mm7|chr5 (112836891-112837316) | |
| 270-654, gnl|Mm7|chr5 (112837291-112836907) | |
| 270-654, gnl|monDom2|scaffold_145 (775293-774868) | |
| 270-654, gnl|oryCun1|scaffold_196526 (3613-4038) | |
| 270-654, gnl|rheMac2|chr11 (109305532-109305957) | |
| 270-654, gnl|rn3|chr12 (43922539-43922111) | |
| 270-654, gnl|tetNig1|chr12 (6509745-6509324) | |
| 270-654, gnl|xenTro1|scaffold_198 (574637-575061) | |
| 358-538, gnl|bosTau2|chr15 (51921793-51921613) | |
| 358-538, gnl|canFam2|chr18 (41944683-41943889) | |
| 358-538, gnl|danRer3|chr14 (50401552-50402356) | |
| 358-538, gnl|dasNov1|scaffold_130449 (4589-5371) | |
| 358-538, gnl|echTel1|scaffold_268027 (7339-6545) | |
| 358-538, gnl|fr1|chrUn (295971057-295971861) | |
| 358-538, gnl|galGal2|chrUn (57379637-57380438) | |
| 358-538, gnl|hg17|chr11 (56760090-56760884) | |
| 358-538, gnl|Hg17|chr11 (56760848-56760668) | |
| 358-538, gnl|loxAfr1|scaffold_97402 (4149-3355) | |
| 358-538, gnl|mm7|chr2 (84981309-84980515) | |
| 358-538, gnl|Mm7|chr2 (84980549-84980729) | |
| 358-538, gnl|monDom2|scaffold_33 (20291941-20292735) | |
| 358-538, gnl|oryCun1|scaffold_205513 (107638-106844) | |
| 358-538, gnl|panTro1|chr9 (57668109-57668903) | |
| 358-538, gnl|rheMac2|chr14 (16181912-16181118) | |
| 358-538, gnl|rn3|chr3 (68263192-68262398) | |
| 358-538, gnl|tetNig1|chr4 (1480340-1481144) | |
| 358-538, gnl|xenTro1|scaffold_135 (925195-924439) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 270-654, gnl|bosTau2|chr17 (40466010-40466394) | |
| 270-654, gnl|canFam2|chr26 (21561178-21560753) | |
| 270-654, gnl|danRer3|chr5 (10790334-10789914) | |
| 270-654, gnl|dasNov1|scaffold_15473 (9651-10079) | |
| 270-654, gnl|echTel1|scaffold_169732 (1156-727) | |
| 270-654, gnl|fr1|chrUn (1921458-1921023) | |
| 270-654, gnl|galGal2|chr15 (6451849-6452272) | |
| 270-654, gnl|hg17|chr12 (107188658-107189083) | |
| 270-654, gnl|Hg17|chr12 (107189058-107188674) | |
| 270-654, gnl|loxAfr1|scaffold_72848 (3748-3323) | |
| 270-654, gnl|mm7|chr5 (112836891-112837316) | |
| 270-654, gnl|Mm7|chr5 (112837291-112836907) | |
| 270-654, gnl|monDom2|scaffold_145 (775293-774868) | |
| 270-654, gnl|oryCun1|scaffold_196526 (3613-4038) | |
| 270-654, gnl|rheMac2|chr11 (109305532-109305957) | |
| 270-654, gnl|rn3|chr12 (43922539-43922111) | |
| 270-654, gnl|tetNig1|chr12 (6509745-6509324) | |
| 270-654, gnl|xenTro1|scaffold_198 (574637-575061) | |
| 358-538, gnl|bosTau2|chr15 (51921793-51921613) | |
| 358-538, gnl|canFam2|chr18 (41944683-41943889) | |
| 358-538, gnl|danRer3|chr14 (50401552-50402356) | |
| 358-538, gnl|dasNov1|scaffold_130449 (4589-5371) | |
| 358-538, gnl|echTel1|scaffold_268027 (7339-6545) | |
| 358-538, gnl|fr1|chrUn (295971057-295971861) | |
| 358-538, gnl|galGal2|chrUn (57379637-57380438) | |
| 358-538, gnl|hg17|chr11 (56760090-56760884) | |
| 358-538, gnl|Hg17|chr11 (56760848-56760668) | |
| 358-538, gnl|loxAfr1|scaffold_97402 (4149-3355) | |
| 358-538, gnl|mm7|chr2 (84981309-84980515) | |
| 358-538, gnl|Mm7|chr2 (84980549-84980729) | |
| 358-538, gnl|monDom2|scaffold_33 (20291941-20292735) | |
| 358-538, gnl|oryCun1|scaffold_205513 (107638-106844) | |
| 358-538, gnl|panTro1|chr9 (57668109-57668903) | |
| 358-538, gnl|rheMac2|chr14 (16181912-16181118) | |
| 358-538, gnl|rn3|chr3 (68263192-68262398) | |
| 358-538, gnl|tetNig1|chr4 (1480340-1481144) | |
| 358-538, gnl|xenTro1|scaffold_135 (925195-924439) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cly (0.120642) |