Ss1.1-Pig2-89B09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAGGAATATCAAAAGTTGTGTATAGATCTTGCAATGGGAGGGATCGACTTGGCCCTTTAA AAATGAGTGATAGTACATGGCTAACATCAGAAATTCATAATCCACTGGCTGTAGGACAGT ATGTCAACAATTGTTCAAATGACAAGGCAGCTAATGTCTGTTATCAGGAATTTGATGTGC CTGCAGTTTTCCCTATAGAACTGAAGCAGTATCTTCCAAATATTGCCTACAGCTATGACA AACAAAGTCCACTCCGATGTGTTGTTCTTGTTGCACTCAGGGACATCAAACAAGGAGAAG AACTTTTTTCAAATTATTATACAATTGTCAGCTGACTCTATAAACTAGAAATTAGGTTTT CTACTAAGCTAGTTAATTCCAAATATTTTTTGTTGTTTCTCTGAGTTCTACCAGATAGTT ATGTCTCAATTCTATCTATAAAAGCTGTTTTCTTCATTACAATTTCACGTTTGTAATGCA ATTCTAGTGTTAGTTTTCACCTAAGTACACAGGAGCTTACTAAATTAAAACCCACTGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAGGAATATCAAAAGTTGTGTATAGATCTTGCAATGGGAGGGATCGACTTGGCCCTTTAA AAATGAGTGATAGTACATGGCTAACATCAGAAATTCATAATCCACTGGCTGTAGGACAGT ATGTCAACAATTGTTCAAATGACAAGGCAGCTAATGTCTGTTATCAGGAATTTGATGTGC CTGCAGTTTTCCCTATAGAACTGAAGCAGTATCTTCCAAATATTGCCTACAGCTATGACA AACAAAGTCCACTCCGATGTGTTGTTCTTGTTGCACTCAGGGACATCAAACAAGGAGAAG AACTTTTTTCAAATTATTATACAATTGTCAGCTGACTCTATAAACTAGAAATTAGGTTTT CTACTAAGCTAGTTAATTCCAAATATTTTTTGTTGTTTCTCTGAGTTCTACCAGATAGTT ATGTCTCAATTCTATCTATAAAAGCTGTTTTCTTCATTACAATTTCACGTTTGTAATGCA ATTCTAGTGTTAGTTTTCACCTAAGTACACAGGAGCTTACTAAATTAAAACCCACTGTCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 24-146, gnl|bosTau2|chr20 (12677653-12677531) | |
| 24-146, gnl|canFam2|chr2 (46916421-46916546) | |
| 24-146, gnl|danRer3|chrUn (27228043-27228166) | |
| 24-146, gnl|dasNov1|scaffold_60959 (6506-6631) | |
| 24-146, gnl|echTel1|scaffold_268363 (939-814) | |
| 24-146, gnl|fr1|chrUn (98203803-98203913) | |
| 24-146, gnl|galGal2|chrZ (932166-932291) | |
| 24-146, gnl|hg17|chr5 (56245454-56245579) | |
| 24-146, gnl|Hg17|chr5 (56245456-56245578) | |
| 24-146, gnl|mm7|chr13 (108879106-108878986) | |
| 24-146, gnl|Mm7|chr13 (108879103-108878985) | |
| 24-146, gnl|monDom2|scaffold_27 (19679030-19679155) | |
| 24-146, gnl|oryCun1|scaffold_181481 (42470-42346) | |
| 24-146, gnl|panTro1|chr4 (59924705-59924580) | |
| 24-146, gnl|rheMac2|chr6 (54573290-54573415) | |
| 24-146, gnl|rn3|chr2 (42957171-42956960) | |
| 24-146, gnl|tetNig1|chr15 (3208336-3208454) | |
| 24-146, gnl|xenTro1|scaffold_591 (552789-552914) | |
| 246-393, gnl|bosTau2|chr20 (12675194-12675049) | |
| 246-393, gnl|Hg17|chr5 (56248397-56248559) | |
| 414-535, gnl|bosTau2|chr20 (12674987-12674863) | |
| 414-535, gnl|Hg17|chr5 (56248625-56248754) | |
| 414-535, gnl|Mm7|chr13 (108877488-108877380) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 24-146, gnl|bosTau2|chr20 (12677653-12677531) | |
| 24-146, gnl|canFam2|chr2 (46916421-46916546) | |
| 24-146, gnl|danRer3|chrUn (27228043-27228166) | |
| 24-146, gnl|dasNov1|scaffold_60959 (6506-6631) | |
| 24-146, gnl|echTel1|scaffold_268363 (939-814) | |
| 24-146, gnl|fr1|chrUn (98203803-98203913) | |
| 24-146, gnl|galGal2|chrZ (932166-932291) | |
| 24-146, gnl|hg17|chr5 (56245454-56245579) | |
| 24-146, gnl|Hg17|chr5 (56245456-56245578) | |
| 24-146, gnl|mm7|chr13 (108879106-108878986) | |
| 24-146, gnl|Mm7|chr13 (108879103-108878985) | |
| 24-146, gnl|monDom2|scaffold_27 (19679030-19679155) | |
| 24-146, gnl|oryCun1|scaffold_181481 (42470-42346) | |
| 24-146, gnl|panTro1|chr4 (59924705-59924580) | |
| 24-146, gnl|rheMac2|chr6 (54573290-54573415) | |
| 24-146, gnl|rn3|chr2 (42957171-42956960) | |
| 24-146, gnl|tetNig1|chr15 (3208336-3208454) | |
| 24-146, gnl|xenTro1|scaffold_591 (552789-552914) | |
| 246-393, gnl|bosTau2|chr20 (12675194-12675049) | |
| 246-393, gnl|Hg17|chr5 (56248397-56248559) | |
| 414-535, gnl|bosTau2|chr20 (12674987-12674863) | |
| 414-535, gnl|Hg17|chr5 (56248625-56248754) | |
| 414-535, gnl|Mm7|chr13 (108877488-108877380) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| vin (0.332557) | |
| hea (0.204499) | |
| aor (0.195274) | |
| bfe (0.149858) | |
| ova (0.129132) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| vin (0.332557) | |
| hea (0.204499) | |
| aor (0.195274) | |
| bfe (0.149858) | |
| ova (0.129132) |