Non-Coding RNA Search

Ss1.1-Pig2-89K17.5

Sequence:


               
               ATTTTCTGCATCACAGAAACTCAGCCAGGCCTGATGTGCTTGCTGTCCAGGAATTTGGAC
ACTGATGGACGCCGGGGGGCCACGCTGCCCGCCCTGCAGCCCAGAGTGAACCGGCCTGTT
CCTGGGCAGTGTGGCTGGGCAGACCTGTAGCGACCCTTCGCGTCTCCGGGGACGTCAGCC
TGCGCCTCCTCCTCGAAGCCCCACTCCCTCTCCCGAGTTCTGCAAGGGAGCCTTGAGGAA
ACAGGCTTTTCTTGCACCTGGGAGTGCTGCTGTTTCTGTACATTTTGGAGGCAAAGATGC
CTGGGAAAAGGCCCCTAAGCGCGGCGGCCCTCCCCGGGAGTGCCAAAAGGGAACGGAAAG
CAATTGCCCTAGACATAAAATTAGAAGTGTTAAGACGATTTGAGATGGGTGAAAAGCTCA
GCCAGATCGCAAAGGCCTTAGGCCTTGCCGTCTCCACAGTGGCTACCATCCGAGATAATA
AAGAAAAAAATCAAAGCGAGCTCCCAAATCGCCACCCCCTTGCGAGCATCTCGGCTGACC
CGCCACCGAAGCGCACTCATGGAGACCATGGAGCGATTGTTGCGTGTGTGGCTCGAAGAC
CACGGCCAGCGGAACGTGGCCCTGAGCGTCTCCGTTATTCAGGAGAAGGCTAAGAGTTTG
TTCGACGACTTACAGCGTGAACAAGGTGCGAGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTCTGCATCACAGAAACTCAGCCAGGCCTGATGTGCTTGCTGTCCAGGAATTTGGAC
ACTGATGGACGCCGGGGGGCCACGCTGCCCGCCCTGCAGCCCAGAGTGAACCGGCCTGTT
CCTGGGCAGTGTGGCTGGGCAGACCTGTAGCGACCCTTCGCGTCTCCGGGGACGTCAGCC
TGCGCCTCCTCCTCGAAGCCCCACTCCCTCTCCCGAGTTCTGCAAGGGAGCCTTGAGGAA
ACAGGCTTTTCTTGCACCTGGGAGTGCTGCTGTTTCTGTACATTTTGGAGGCAAAGATGC
CTGGGAAAAGGCCCCTAAGCGCGGCGGCCCTCCCCGGGAGTGCCAAAAGGGAACGGAAAG
CAATTGCCCTAGACATAAAATTAGAAGTGTTAAGACGATTTGAGATGGGTGAAAAGCTCA
GCCAGATCGCAAAGGCCTTAGGCCTTGCCGTCTCCACAGTGGCTACCATCCGAGATAATA
AAGAAAAAAATCAAAGCGAGCTCCCAAATCGCCACCCCCTTGCGAGCATCTCGGCTGACC
CGCCACCGAAGCGCACTCATGGAGACCATGGAGCGATTGTTGCGTGTGTGGCTCGAAGAC
CACGGCCAGCGGAACGTGGCCCTGAGCGTCTCCGTTATTCAGGAGAAGGCTAAGAGTTTG
TTCGACGACTTACAGCGTGAACAAGGTGCGAGCTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|49619234|ref|NP_659476.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|49619234|ref|NP_659476.2|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               92-695, gnl|bosTau2|chr18 (15969472-15968875)
               

               
               92-695, gnl|Hg17|chr16 (88566036-88565443)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               92-695, gnl|bosTau2|chr18 (15969472-15968875)
               

               
               92-695, gnl|Hg17|chr16 (88566036-88565443)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	92-695, gnl\|bosTau2\|chr18 (15969472-15968875)
	92-695, gnl\|Hg17\|chr16 (88566036-88565443)