Non-Coding RNA Search

Ss1.1-Pig2-92A16.5

Sequence:


               
               GAGCCTGAAGTCCCTACTCAGTCACCTACCATTTCTTTGTGGTTGGGGTAATATGTCTGC
TCAATGAGTGGGAACTTTTCTCCTCCCAATGTCTTGTAAATGGCCACCAGCTGGGCAAAC
TGCAAAAAAGAAGCAAAGTTTTGGTTTACCTGAACAGCTTCTGGAACAGACAAACAAAAT
GTCAATCTATTGAACAAATATTTATTAAGCATCTGTCCCACTAAGGGCTTTGCGCAAAGC
ACTCTGAGGATATAAAAGAGGCGTCTCATCCCTTCTCTCCAACAACATGAATTTATTGGG
GAACGGTGAATGAGCTAACATTCATTCAGTACCTACTCAATTTTAATGATATTTCATTTA
ATCTTCATATCAAATTGCTGAACTAGGTTCTTTATCATCTTCATTTTATATATAAAGCTC
AGGGAGGGTAGGAAACTTGCCTGGAATCAGAGCTGCAAAGAGGTAAAGTTGGCATTGAAA
ACTGTGTCTCTAACTCTAAATACCTGCATCTCTATAGATGATAAGTGAGAAGCTGGGTAG
GTAACACCGGGCCCAGTCTTGGAAGTTCAAATGCCAAGCAAAAGAATGGTAGCTTTTTCC
TGTAGGGAGTATGGAGTCATCAGAGTCTAAGCGGGGGGGTCATGAAGGAAGCTGTTCTTC
AAGAAGATTTAGATGGTCATGAAATGTAGGACAGACAGACCCAGTCTCCTGGGACTCACT
ACTCATCTAAGAACCCAACTTATAGGAACCTTCGCTGATGAGAAGCCAGAACAACTCCAC
GGGGAAGAGTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCTGAAGTCCCTACTCAGTCACCTACCATTTCTTTGTGGTTGGGGTAATATGTCTGC
TCAATGAGTGGGAACTTTTCTCCTCCCAATGTCTTGTAAATGGCCACCAGCTGGGCAAAC
TGCAAAAAAGAAGCAAAGTTTTGGTTTACCTGAACAGCTTCTGGAACAGACAAACAAAAT
GTCAATCTATTGAACAAATATTTATTAAGCATCTGTCCCACTAAGGGCTTTGCGCAAAGC
ACTCTGAGGATATAAAAGAGGCGTCTCATCCCTTCTCTCCAACAACATGAATTTATTGGG
GAACGGTGAATGAGCTAACATTCATTCAGTACCTACTCAATTTTAATGATATTTCATTTA
ATCTTCATATCAAATTGCTGAACTAGGTTCTTTATCATCTTCATTTTATATATAAAGCTC
AGGGAGGGTAGGAAACTTGCCTGGAATCAGAGCTGCAAAGAGGTAAAGTTGGCATTGAAA
ACTGTGTCTCTAACTCTAAATACCTGCATCTCTATAGATGATAAGTGAGAAGCTGGGTAG
GTAACACCGGGCCCAGTCTTGGAAGTTCAAATGCCAAGCAAAAGAATGGTAGCTTTTTCC
TGTAGGGAGTATGGAGTCATCAGAGTCTAAGCGGGGGGGTCATGAAGGAAGCTGTTCTTC
AAGAAGATTTAGATGGTCATGAAATGTAGGACAGACAGACCCAGTCTCCTGGGACTCACT
ACTCATCTAAGAACCCAACTTATAGGAACCTTCGCTGATGAGAAGCCAGAACAACTCCAC
GGGGAAGAGTGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-586, gnl|bosTau2|chr22 (45632297-45631703)
               

               
               1-586, gnl|Hg17|chr3 (12167857-12167282)
               

               
               1-586, gnl|Mm7|chr6 (115269876-115269153)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-586, gnl|bosTau2|chr22 (45632297-45631703)
               

               
               1-586, gnl|Hg17|chr3 (12167857-12167282)
               

               
               1-586, gnl|Mm7|chr6 (115269876-115269153)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               duo (0.172801)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)

	1-586, gnl\|bosTau2\|chr22 (45632297-45631703)
	1-586, gnl\|Hg17\|chr3 (12167857-12167282)
	1-586, gnl\|Mm7\|chr6 (115269876-115269153)