Non-Coding RNA Search

Ss1.1-Pig2-92E07.5

Sequence:


               
               TCAGATGGGCTCCCCACACAACCCGATTTCTTCAGTGTCTTAACAGTCGTGTCTTAATCC
ACATTTCTGTAGATTAGATGCTGTTGCAGGCAGTGGCTTATGTCATTTCAGATTTGCAGC
TAACTGAAGTTTCTAAGTACATGTATAAATCCATATAATATATGCTATTCATATTTTGTA
TCACTTTGTTTTGTGCTGTCTAGTTAACCTGATGCCAAGTACAGTGCAATTAGAAGAGCG
GGTTTTTTGCACCCGTGCTCTAATAAGCAGCAGCTGCTTTTGTGGGAGGAAAGAAATGAG
AGGCAACTGTATGGAGAGTATTTGAAGGGTGTTGGCAGAATAAAGGCAGCTTTCGTCCGC
CGTGTCCTATAAGGCATGTTGTGTGACCAATCCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATGGGCTCCCCACACAACCCGATTTCTTCAGTGTCTTAACAGTCGTGTCTTAATCC
ACATTTCTGTAGATTAGATGCTGTTGCAGGCAGTGGCTTATGTCATTTCAGATTTGCAGC
TAACTGAAGTTTCTAAGTACATGTATAAATCCATATAATATATGCTATTCATATTTTGTA
TCACTTTGTTTTGTGCTGTCTAGTTAACCTGATGCCAAGTACAGTGCAATTAGAAGAGCG
GGTTTTTTGCACCCGTGCTCTAATAAGCAGCAGCTGCTTTTGTGGGAGGAAAGAAATGAG
AGGCAACTGTATGGAGAGTATTTGAAGGGTGTTGGCAGAATAAAGGCAGCTTTCGTCCGC
CGTGTCCTATAAGGCATGTTGTGTGACCAATCCGGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-396, gnl|bosTau2|chr11 (79681596-79681993)
               

               
               1-396, gnl|Hg17|chr13 (36320855-36320467)
               

               
               1-396, gnl|Mm7|chr3 (54926668-54927022)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-396, gnl|bosTau2|chr11 (79681596-79681993)
               

               
               1-396, gnl|Hg17|chr13 (36320855-36320467)
               

               
               1-396, gnl|Mm7|chr3 (54926668-54927022)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ova (0.129132)
               

               
               bla (0.124347)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)
               

               
               bla (0.124347)
               

               
               spc (0.113366)

	1-396, gnl\|bosTau2\|chr11 (79681596-79681993)
	1-396, gnl\|Hg17\|chr13 (36320855-36320467)
	1-396, gnl\|Mm7\|chr3 (54926668-54927022)