Non-Coding RNA Search

Ss1.1-Pig2-93E13.5

Sequence:


               
               AAATACCTTTCTAAAATGTGTTGCCAAAGTTTATTTGCCAACATTGATTTGGCAAAATAT
TCTTTAAAATCATTGTCATTTTTCACACGTATAAATTCTTAAGTACCTTATATATTCAAG
TGTAAATGTAATCCCACTTTCCATCAACCGTTCATTTGTTCCAGACCCTTGTGTTAAATG
CTTCAAAGTTTTATCCATTTTTTCTGTGGGGGAAAATTTTTTTTTTGGAGGGATCAGTTT
TGAATTCCTATGCTCTGTGCTGGGAACGTGTCTCAAGTTCCATTTTAAAAATGACTTCGG
AGAACTGTTAGCATGTAATTTAAACAAGTTATTTTTTCAAAGTGGAATTTAATTTTTTTG
AAATGAATCTTGGTGGAGAATGAGTAGGCCTAGGCTAACTCTTCAATATCAGAGGACATT
TACTTTCCTTTCTAAGGCTGGACAGGGGTTTAATTTCACGGTAATATGATAATAAGAAAA
CGCATCAAAGCAGATGGGGGAAGGAATGGTTAAAGTTTACCATTGAGCCCTTTTTGCCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATACCTTTCTAAAATGTGTTGCCAAAGTTTATTTGCCAACATTGATTTGGCAAAATAT
TCTTTAAAATCATTGTCATTTTTCACACGTATAAATTCTTAAGTACCTTATATATTCAAG
TGTAAATGTAATCCCACTTTCCATCAACCGTTCATTTGTTCCAGACCCTTGTGTTAAATG
CTTCAAAGTTTTATCCATTTTTTCTGTGGGGGAAAATTTTTTTTTTGGAGGGATCAGTTT
TGAATTCCTATGCTCTGTGCTGGGAACGTGTCTCAAGTTCCATTTTAAAAATGACTTCGG
AGAACTGTTAGCATGTAATTTAAACAAGTTATTTTTTCAAAGTGGAATTTAATTTTTTTG
AAATGAATCTTGGTGGAGAATGAGTAGGCCTAGGCTAACTCTTCAATATCAGAGGACATT
TACTTTCCTTTCTAAGGCTGGACAGGGGTTTAATTTCACGGTAATATGATAATAAGAAAA
CGCATCAAAGCAGATGGGGGAAGGAATGGTTAAAGTTTACCATTGAGCCCTTTTTGCCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-532, gnl|bosTau2|chr6 (16474751-16475284)
               

               
               1-532, gnl|Hg17|chr4 (89537783-89536526)
               

               
               1-532, gnl|Mm7|chr6 (57470902-57470441)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-532, gnl|bosTau2|chr6 (16474751-16475284)
               

               
               1-532, gnl|Hg17|chr4 (89537783-89536526)
               

               
               1-532, gnl|Mm7|chr6 (57470902-57470441)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	1-532, gnl\|bosTau2\|chr6 (16474751-16475284)
	1-532, gnl\|Hg17\|chr4 (89537783-89536526)
	1-532, gnl\|Mm7\|chr6 (57470902-57470441)