Ss1.1-Pig2-97G23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCATGGACAGCGACCTGCTGAAGTTAAACCAGCTCAAGTTCCGGAAGAAGAAGCTGCGAT TTGGCCGGAGCCGGATCCACGAGTGGGGGCTGTTTGCCATGGAACCCATCGCAGCCGACG AGATGGTCATCGAATATGTGGGTCAGAACATCCGCCAGATGGTGGCCGACATGCGGGAGA AGCGCTACGTGCAGGAGGGCATTGGCAGCAGCTACCTGTTCCGGGTGGATCATGACACCA TCATCGATGCCACGAAGTGTGGCAACCTGGCGAGGTTCATCAACCACTGCTGCACGCCCA ACTGCTATGCCAAGGTGATCACCATCGAGTCGCAGAAGAAGATCGTGATCTACTCCAAGC AGCCCATCGGTGTGGACGAGGAGATCACCTACGACTACAAGTTCCCGCTGGAGGACAACA AGATCCCGTGTCTGTGCGGCACCGAGAGCTGCCGCGGCTCCCTCAACTGAGGTGGGGCAG GACTGGTGCCCTCACCCCTATTTATTCCCCTTGGTGCCCTGAGCTCCCAGCCCACCCAGC CTTATTGGGCTCAGCAGGGCCCACGTGCCCCATCTCCGAATGTGGGGTTGGGGGCCCCCC GAGCCCATGATGGAGCCTCATTCCCTTGAGGCGACTTCTGCTTCCCATCTTGCCCCTGCC CACCCATCCCATGAATTTTTTTTCTTTGCGGAGAAGAAGCTGTAAATGTTTTGTAGCTGC CAGCAGCTGTTTCCTGTGGAAACATGGGGTGCCGGCCCTGTACAGATCCTGTTCTTGGGG GCTGCACAGCCCCCTTGCTTTGTGTTCATGGGGCTTCCCCTTTGTGCCCTGCGTGCACCC CTCCCCAGTTTAGGGGTCTCTAGGGGCAGTGGCCATGTTCTCCCCCTGGGGGGGGGCCCT GCGCCCCCAGTCCTGGGGACTCCGTGCCTGGAACCCTGCCTCATCTTCTGTTCCTGCCAG ACCCTGTGGGTCACCCTCCCAGCCTGGTGTCTGGAAGCTCCGGCTTTGCCAGGCCGGGAT GGTGGGGGGCGGGCCCTTCCTGTTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCA ACGCCACATTTTTATAATTGTGATTAAACTTTATTGTACAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCATGGACAGCGACCTGCTGAAGTTAAACCAGCTCAAGTTCCGGAAGAAGAAGCTGCGAT TTGGCCGGAGCCGGATCCACGAGTGGGGGCTGTTTGCCATGGAACCCATCGCAGCCGACG AGATGGTCATCGAATATGTGGGTCAGAACATCCGCCAGATGGTGGCCGACATGCGGGAGA AGCGCTACGTGCAGGAGGGCATTGGCAGCAGCTACCTGTTCCGGGTGGATCATGACACCA TCATCGATGCCACGAAGTGTGGCAACCTGGCGAGGTTCATCAACCACTGCTGCACGCCCA ACTGCTATGCCAAGGTGATCACCATCGAGTCGCAGAAGAAGATCGTGATCTACTCCAAGC AGCCCATCGGTGTGGACGAGGAGATCACCTACGACTACAAGTTCCCGCTGGAGGACAACA AGATCCCGTGTCTGTGCGGCACCGAGAGCTGCCGCGGCTCCCTCAACTGAGGTGGGGCAG GACTGGTGCCCTCACCCCTATTTATTCCCCTTGGTGCCCTGAGCTCCCAGCCCACCCAGC CTTATTGGGCTCAGCAGGGCCCACGTGCCCCATCTCCGAATGTGGGGTTGGGGGCCCCCC GAGCCCATGATGGAGCCTCATTCCCTTGAGGCGACTTCTGCTTCCCATCTTGCCCCTGCC CACCCATCCCATGAATTTTTTTTCTTTGCGGAGAAGAAGCTGTAAATGTTTTGTAGCTGC CAGCAGCTGTTTCCTGTGGAAACATGGGGTGCCGGCCCTGTACAGATCCTGTTCTTGGGG GCTGCACAGCCCCCTTGCTTTGTGTTCATGGGGCTTCCCCTTTGTGCCCTGCGTGCACCC CTCCCCAGTTTAGGGGTCTCTAGGGGCAGTGGCCATGTTCTCCCCCTGGGGGGGGGCCCT GCGCCCCCAGTCCTGGGGACTCCGTGCCTGGAACCCTGCCTCATCTTCTGTTCCTGCCAG ACCCTGTGGGTCACCCTCCCAGCCTGGTGTCTGGAAGCTCCGGCTTTGCCAGGCCGGGAT GGTGGGGGGCGGGCCCTTCCTGTTGGGCTGGACTGTACATATGTTAATAGCGCAAACCCA ACGCCACATTTTTATAATTGTGATTAAACTTTATTGTACAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 33-161, gnl|bosTau2|chr25 (22880291-22880419) | |
| 33-161, gnl|Hg17|chr16 (30899877-30900005) | |
| 33-161, gnl|Mm7|chr7 (123894156-123894284) | |
| 37-158, gnl|bosTau2|chr17 (28747057-28747178) | |
| 37-158, gnl|canFam2|chr26 (10465453-10465316) | |
| 37-158, gnl|danRer3|chr10 (36219289-36219159) | |
| 37-158, gnl|dasNov1|scaffold_75974 (3712-3602) | |
| 37-158, gnl|echTel1|scaffold_300498 (2976-3113) | |
| 37-158, gnl|fr1|chrUn (42051939-42052076) | |
| 37-158, gnl|galGal2|chr15 (5633972-5634109) | |
| 37-158, gnl|hg17|chr12 (120728349-120728486) | |
| 37-158, gnl|Hg17|chr12 (120728359-120728480) | |
| 37-158, gnl|loxAfr1|scaffold_26866 (45793-45656) | |
| 37-158, gnl|mm7|chr5 (122393886-122394030) | |
| 37-158, gnl|Mm7|chr5 (122393903-122394024) | |
| 37-158, gnl|monDom2|scaffold_97 (2035691-2035830) | |
| 37-158, gnl|oryCun1|scaffold_188811 (6681-6817) | |
| 37-158, gnl|panTro1|chrUn_random (16981951-16982088) | |
| 37-158, gnl|rheMac2|chr11 (122913526-122913663) | |
| 37-158, gnl|rn3|chr12 (34429512-34429370) | |
| 37-158, gnl|tetNig1|chr4 (1592251-1592114) | |
| 37-158, gnl|xenTro1|scaffold_791 (222405-222542) | |
| 185-468, gnl|bosTau2|chr15 (15023430-15023144) | |
| 185-468, gnl|Hg17|chr11 (117897807-117898095) | |
| 185-468, gnl|Mm7|chr9 (44742534-44742249) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 33-161, gnl|bosTau2|chr25 (22880291-22880419) | |
| 33-161, gnl|Hg17|chr16 (30899877-30900005) | |
| 33-161, gnl|Mm7|chr7 (123894156-123894284) | |
| 37-158, gnl|bosTau2|chr17 (28747057-28747178) | |
| 37-158, gnl|canFam2|chr26 (10465453-10465316) | |
| 37-158, gnl|danRer3|chr10 (36219289-36219159) | |
| 37-158, gnl|dasNov1|scaffold_75974 (3712-3602) | |
| 37-158, gnl|echTel1|scaffold_300498 (2976-3113) | |
| 37-158, gnl|fr1|chrUn (42051939-42052076) | |
| 37-158, gnl|galGal2|chr15 (5633972-5634109) | |
| 37-158, gnl|hg17|chr12 (120728349-120728486) | |
| 37-158, gnl|Hg17|chr12 (120728359-120728480) | |
| 37-158, gnl|loxAfr1|scaffold_26866 (45793-45656) | |
| 37-158, gnl|mm7|chr5 (122393886-122394030) | |
| 37-158, gnl|Mm7|chr5 (122393903-122394024) | |
| 37-158, gnl|monDom2|scaffold_97 (2035691-2035830) | |
| 37-158, gnl|oryCun1|scaffold_188811 (6681-6817) | |
| 37-158, gnl|panTro1|chrUn_random (16981951-16982088) | |
| 37-158, gnl|rheMac2|chr11 (122913526-122913663) | |
| 37-158, gnl|rn3|chr12 (34429512-34429370) | |
| 37-158, gnl|tetNig1|chr4 (1592251-1592114) | |
| 37-158, gnl|xenTro1|scaffold_791 (222405-222542) | |
| 185-468, gnl|bosTau2|chr15 (15023430-15023144) | |
| 185-468, gnl|Hg17|chr11 (117897807-117898095) | |
| 185-468, gnl|Mm7|chr9 (44742534-44742249) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) | |
| ecc (0.115035) |