Non-Coding RNA Search

Ss1.1-Pig2-99J14.5

Sequence:


               
               GCGGTTGGCAGAAAAGTCTGTACTTCCATCTGTGCCTGGTTAGGAAAATATTTCGCGATA
CTGAAATAGCATCAGCCTTGCTCTCTTTTGTGCGCGTGTGTATCTGGACTGTATGTCATT
CGGTGCTCTGAAGGTTTGTTGCTATCTAATCTTATATATATATATATATATTTATAAAGT
TACTGGCAAGGAAATGGGACAGCCAGTCCAGGTGTTCTGTGCATACATTCTTTATTTGCT
GGTTTCCGTGAAGGTTGGTCTCGTTCTTGCATTTTCTCTTTAATGAAAGTTTTCTCTGAC
CATGTGTTTCAGAAAATTAGAGGGCATGGCATTTTAACTTGGGAATCTTTCTATCTTTTG
CTTCTCTCTCTGCAAATAACCTTTGCTGCTAACTTTTAGGAGCTGTTCTTAGGTGAAATG
CTCATGGATTTATTTCGGTTTGGAATGTGGGCGATTAGGAGTTTCTGCTCTCTGGAAGGC
GATATATGCCTGCGATATGTATCAAACTCATAAACACTTTATGACTGAGGTACAGACATG
TGAGTGACCGATTTTGGAGAAATTTAATCCTTCCACTCGGATTTTCCTTTATGCTCACTA
GTAATCAGTAACTCATCAAATAGGATCAGTTCTGGCCATTTCTTAACCTGTGCTGATATT
TTAAAAATGTATTTTCTATTTATAAGATTCTAGTTGCTCTGTAAAATAAAGATTGGTCCC
CTCTGGTATTATCTATTGGAACTATCTCTCTTTATCCATGGAAACTCTTGTCTTCAGGTT
GATTTCCTTTCTTCCAGGAGGGCTATTGCATTAAATAACAACTAGTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGTTGGCAGAAAAGTCTGTACTTCCATCTGTGCCTGGTTAGGAAAATATTTCGCGATA
CTGAAATAGCATCAGCCTTGCTCTCTTTTGTGCGCGTGTGTATCTGGACTGTATGTCATT
CGGTGCTCTGAAGGTTTGTTGCTATCTAATCTTATATATATATATATATATTTATAAAGT
TACTGGCAAGGAAATGGGACAGCCAGTCCAGGTGTTCTGTGCATACATTCTTTATTTGCT
GGTTTCCGTGAAGGTTGGTCTCGTTCTTGCATTTTCTCTTTAATGAAAGTTTTCTCTGAC
CATGTGTTTCAGAAAATTAGAGGGCATGGCATTTTAACTTGGGAATCTTTCTATCTTTTG
CTTCTCTCTCTGCAAATAACCTTTGCTGCTAACTTTTAGGAGCTGTTCTTAGGTGAAATG
CTCATGGATTTATTTCGGTTTGGAATGTGGGCGATTAGGAGTTTCTGCTCTCTGGAAGGC
GATATATGCCTGCGATATGTATCAAACTCATAAACACTTTATGACTGAGGTACAGACATG
TGAGTGACCGATTTTGGAGAAATTTAATCCTTCCACTCGGATTTTCCTTTATGCTCACTA
GTAATCAGTAACTCATCAAATAGGATCAGTTCTGGCCATTTCTTAACCTGTGCTGATATT
TTAAAAATGTATTTTCTATTTATAAGATTCTAGTTGCTCTGTAAAATAAAGATTGGTCCC
CTCTGGTATTATCTATTGGAACTATCTCTCTTTATCCATGGAAACTCTTGTCTTCAGGTT
GATTTCCTTTCTTCCAGGAGGGCTATTGCATTAAATAACAACTAGTGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-828, gnl|bosTau2|chr23 (35487679-35488539)
               

               
               1-828, gnl|Hg17|chr6 (16845402-16844584)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-828, gnl|bosTau2|chr23 (35487679-35488539)
               

               
               1-828, gnl|Hg17|chr6 (16845402-16844584)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	1-828, gnl\|bosTau2\|chr23 (35487679-35488539)
	1-828, gnl\|Hg17\|chr6 (16845402-16844584)