Non-Coding RNA Search

Ss1.1-Pig2-99N20.5

Sequence:


               
               TCACGGGACACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
GTTCCTAGTCAGATTCATTAACCACTGAGCCACAACGGGAACTCCCCAACTGGCCTCTTA
ACTCTGATACTCAGGCTTTCCTTTTTGCACGTCAGCCAGGAAGCTCTGCTCAGTCTCACC
CTGGCCTTTCTCTGCCTTCACTGTTGAACTTTGGAAAGATGGAAACTATCCTGCTTTGTG
GCTCCAGGAGTTCTGTGGTGAGTTGGGAGGGAGCCCTGGAAAAATCACTGAGAGGCCTGA
CTGGGTTCAAGGCCACACAGTTGATGTGTGAAGGCCGTGTTGACAGTTGTGCAGAAATGT
TGATGGCGAAGTCCTGGGACGTTGACTGCTCGGTGGTAAGGGCTTCAAAGCCTGGCCTGC
AAGAGAGGCCCTTGGCAGTCCTGTTAAATCTCTTCTAACAGAATTGAAGCCAACTCCCTC
TTGTCCTATGTGGGTGCAGTATTCTTGTGCAAATGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACGGGACACA------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
GTTCCTAGTCAGATTCATTAACCACTGAGCCACAACGGGAACTCCCCAACTGGCCTCTTA
ACTCTGATACTCAGGCTTTCCTTTTTGCACGTCAGCCAGGAAGCTCTGCTCAGTCTCACC
CTGGCCTTTCTCTGCCTTCACTGTTGAACTTTGGAAAGATGGAAACTATCCTGCTTTGTG
GCTCCAGGAGTTCTGTGGTGAGTTGGGAGGGAGCCCTGGAAAAATCACTGAGAGGCCTGA
CTGGGTTCAAGGCCACACAGTTGATGTGTGAAGGCCGTGTTGACAGTTGTGCAGAAATGT
TGATGGCGAAGTCCTGGGACGTTGACTGCTCGGTGGTAAGGGCTTCAAAGCCTGGCCTGC
AAGAGAGGCCCTTGGCAGTCCTGTTAAATCTCTTCTAACAGAATTGAAGCCAACTCCCTC
TTGTCCTATGTGGGTGCAGTATTCTTGTGCAAATGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               58-467, gnl|bosTau2|chr2 (64714849-64714430)
               

               
               58-467, gnl|Hg17|chr2 (219445899-219446325)
               

               
               58-467, gnl|Mm7|chr1 (74938423-74938802)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               58-467, gnl|bosTau2|chr2 (64714849-64714430)
               

               
               58-467, gnl|Hg17|chr2 (219445899-219446325)
               

               
               58-467, gnl|Mm7|chr1 (74938423-74938802)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eli (0.151814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eli (0.151814)

	58-467, gnl\|bosTau2\|chr2 (64714849-64714430)
	58-467, gnl\|Hg17\|chr2 (219445899-219446325)
	58-467, gnl\|Mm7\|chr1 (74938423-74938802)