Non-Coding RNA Search

Ss1.1-Pig3-SRG8001J06.5

Sequence:


               
               GAGCCCAAGCCACAGTGGCAACCCGAGCCTCAGCAGTGACAACATTGACTCCTTAACTGC
TGCACCACCAGGGAACTCCAATACTTCTATTTATTTATGTATTGTCTTTGAGGGCCACAC
TTGCAGCATATGAAAGTTCCCAAACTAAGAGTTGTACTGGAGCTGTAGCTGCTGGCCCAC
CCACAGCCATAGATAGCAACGCTAGAGCGGAGGTGAGTCTGTGACCTACACCACAGTTCA
TGGCAACCCCGGATCCCTCGCCCACTGAGAGAGGCCAGGGATCGAACTTGCGTCCTCGTG
GATGCTATTCGGATGCGTTTCCACTGCGGGAACCCCAATACTTTTATTTTTTTTTAATGT
CCCCAGTTTCGCTGGTCATTTTAGCATAGGTTCATCCCAACGGGTATCTAGAGCAAGGCC
TCTCAGTCTTTAACATGCATACAGGTCCCCTGGGAGCTTGTGACAGTGCAGATTCTGACC
AGGTGTGCATGGGATGGGGCCTGAGACCCTGCGTGTCCAGGAAGCTCCCCAGGGATGCAG
ATTTGACAAAGTTAGGTCTCTTTCCAGGTCTCAGAGCAGTAAAGCCCACAGGCCCTCCCT
CCCCTTTGCTCGGTCAAATGGCTATTTTAAAGTCTCTAGGAGTTCTTCCTGCTTCTTAAA
AACCACAAAGAAATGAATTTTTAAAGCCTCAAAAGTGCATTGCCATGGTTTTATTATTAG
TGTCCTAAGTGGGACTGAAAGGTAATAAATGATTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCCCAAGCCACAGTGGCAACCCGAGCCTCAGCAGTGACAACATTGACTCCTTAACTGC
TGCACCACCAGGGAACTCCAATACTTCTATTTATTTATGTATTGTCTTTGAGGGCCACAC
TTGCAGCATATGAAAGTTCCCAAACTAAGAGTTGTACTGGAGCTGTAGCTGCTGGCCCAC
CCACAGCCATAGATAGCAACGCTAGAGCGGAGGTGAGTCTGTGACCTACACCACAGTTCA
TGGCAACCCCGGATCCCTCGCCCACTGAGAGAGGCCAGGGATCGAACTTGCGTCCTCGTG
GATGCTATTCGGATGCGTTTCCACTGCGGGAACCCCAATACTTTTATTTTTTTTTAATGT
CCCCAGTTTCGCTGGTCATTTTAGCATAGGTTCATCCCAACGGGTATCTAGAGCAAGGCC
TCTCAGTCTTTAACATGCATACAGGTCCCCTGGGAGCTTGTGACAGTGCAGATTCTGACC
AGGTGTGCATGGGATGGGGCCTGAGACCCTGCGTGTCCAGGAAGCTCCCCAGGGATGCAG
ATTTGACAAAGTTAGGTCTCTTTCCAGGTCTCAGAGCAGTAAAGCCCACAGGCCCTCCCT
CCCCTTTGCTCGGTCAAATGGCTATTTTAAAGTCTCTAGGAGTTCTTCCTGCTTCTTAAA
AACCACAAAGAAATGAATTTTTAAAGCCTCAAAAGTGCATTGCCATGGTTTTATTATTAG
TGTCCTAAGTGGGACTGAAAGGTAATAAATGATTTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               341-756, gnl|bosTau2|chr19 (56327544-56327116)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               341-756, gnl|bosTau2|chr19 (56327544-56327116)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sug (0.127291)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)
               

               
               jej (0.0989218)