Non-Coding RNA Search

Ss1.1-Pig3-SRG8001M16.3

Sequence:


               
               CAATTAAATACAGTGTCATCTAGTATCAAAACCAGTTCTTCTCAGGACATAAATAAGACA
CTATCGAGAAGCACATCTGAAATGGTAGCCAGGCCTGCTTCATCTTCTAATACGAAGCTG
ATAGAAAAGTCTAAAGGCATTGATCAGCGCAGACATACCATCGTAAAAGCAACTATTGAT
AGTCGATGGGCTCGGCCCAAAGAAACTGCAGAGGAGAGAAAAGCTCGTCTGAGTGAGTGG
AAAGCTGGCAAAGGAAGGGTGCTGAAAAGGCCCCCTAACTCAGCAGTTACCCAGCCTGAG
CCTGAAGGACAGAGTGAAAAACTGGTGGAGTCCTTCTGGACTACCATGGCCGAAGAAGAT
GAACAACGATTGTTTACTGAAAAAATAAACAAGACATTTTCCGAATGCCTAAACCTGATT
AATGAGGGATGTCCAAAAGAAGAGATATTGGCTACCCTGAATGACCTGATTAAAAATATC
CCAGATGCCCAAAAGCTTGTTAAATATTGGATATGCCTTGCACGTATTGAACAACTCACA
AGTCCAATTGAAAATATTATCGCAATCTATGAGAAGGCCATTCTGGCAGGAGCTCAGCCT
ATTGAAGAAATGCGACATGCAATTGTTGAAATTCTGACAAAGAAGAGCCAAGAAAAAGTG
AAATTTGGAGAAAAAATTGAGGAGTCCTCTGCAACTAAGGAACAAATCCAAGAAGTCAAC
GTTGATGACACAGTTTAAAAAAGAAGATGCAGTTTGATGAAACAAATTCTGCATTTAAAG
AGCTGAAGTTTCTAACACCAGTTAGAAAGAGAGCAAGATGACAAAACAAAAGATCCAGCC
AATGACGTTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATTAAATACAGTGTCATCTAGTATCAAAACCAGTTCTTCTCAGGACATAAATAAGACA
CTATCGAGAAGCACATCTGAAATGGTAGCCAGGCCTGCTTCATCTTCTAATACGAAGCTG
ATAGAAAAGTCTAAAGGCATTGATCAGCGCAGACATACCATCGTAAAAGCAACTATTGAT
AGTCGATGGGCTCGGCCCAAAGAAACTGCAGAGGAGAGAAAAGCTCGTCTGAGTGAGTGG
AAAGCTGGCAAAGGAAGGGTGCTGAAAAGGCCCCCTAACTCAGCAGTTACCCAGCCTGAG
CCTGAAGGACAGAGTGAAAAACTGGTGGAGTCCTTCTGGACTACCATGGCCGAAGAAGAT
GAACAACGATTGTTTACTGAAAAAATAAACAAGACATTTTCCGAATGCCTAAACCTGATT
AATGAGGGATGTCCAAAAGAAGAGATATTGGCTACCCTGAATGACCTGATTAAAAATATC
CCAGATGCCCAAAAGCTTGTTAAATATTGGATATGCCTTGCACGTATTGAACAACTCACA
AGTCCAATTGAAAATATTATCGCAATCTATGAGAAGGCCATTCTGGCAGGAGCTCAGCCT
ATTGAAGAAATGCGACATGCAATTGTTGAAATTCTGACAAAGAAGAGCCAAGAAAAAGTG
AAATTTGGAGAAAAAATTGAGGAGTCCTCTGCAACTAAGGAACAAATCCAAGAAGTCAAC
GTTGATGACACAGTTTAAAAAAGAAGATGCAGTTTGATGAAACAAATTCTGCATTTAAAG
AGCTGAAGTTTCTAACACCAGTTAGAAAGAGAGCAAGATGACAAAACAAAAGATCCAGCC
AATGACGTTAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55663990|emb|CAH71661.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55663990|emb|CAH71661.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-190, gnl|bosTau2|chr9 (20076941-20076750)
               

               
               2-190, gnl|Hg17|chr13 (51933834-51934028)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-190, gnl|bosTau2|chr9 (20076941-20076750)
               

               
               2-190, gnl|Hg17|chr13 (51933834-51934028)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	2-190, gnl\|bosTau2\|chr9 (20076941-20076750)
	2-190, gnl\|Hg17\|chr13 (51933834-51934028)