Non-Coding RNA Search

Ss1.1-Pig3-SRG8002C22.3

Sequence:


               
               GGAAGAAGGATCAGTACTGGTCATAAAAATTTTTAGAGAAATGTAAAGCAAAAAAGTCAA
ATGTCATGATGTGTTTACATAAAGTGACACCAAGTGTGCCTGCCTCTCCTGGTTCCCCTT
CCATCTTCTGCCAACCCTGAGACAAGCCATCCCCTGCCTTTCCTCAGTCTACTCAATGTG
CAGACAACAAGGATGACGCACTTCCACGTACTCAATCATCAATAGTCGTTGTACTGTACA
GTTGATAAACTTAACTGGTGTGAGTGTATGAGTGTCTTGGTGTGAAAACCCAAGAATCGT
ACAGCAATGAATGCACAGACGTCTGTGTGTTCTCACCATCGTTGATTGTGTCACCCATCG
TGTGCAAGACTTGTACTGAAGTGGACAGCCTGTCCTTAGCAAGCTTAAGATGAGTGATAT
TTAATATAAAGTTTCCAATGTGTTCATTTTCTTACTGCTTTGTTATTCTGCTTTCAAAGA
ATTACATTACTGTACAGCATGGAGAAACTGCATGTCAGCTTGTCATCAGTATTTTTTTTT
TAAGTTTCCAATACTGTATTATTAATATGACTGGAATACTGCAACTGTAAAAGTTTTAAT
GATGATGCATTCATTAGTGTATAAGCTAGGCTACCCTGAGGCAGTTGCATCAATTACACA
AGGCTACCACACAGCAATCATATTGCTACTTCTTTGTTACCAATGTGTGAATCTTTATAC
CTGTAAATAAATACAAATTTCTTTTTCACATTATCTTTTCATTTTTGATGTCTAGTGTTA
GTAATACATGTAACATCTACAGTGTTTGGTGTCATATAATATTGATGTTGATACTGACAG
ATGATTCATCTTATAAACAGTTGATACAAATTTACAGTATCAATAAAAACAATACAGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAGAAGGATCAGTACTGGTCATAAAAATTTTTAGAGAAATGTAAAGCAAAAAAGTCAA
ATGTCATGATGTGTTTACATAAAGTGACACCAAGTGTGCCTGCCTCTCCTGGTTCCCCTT
CCATCTTCTGCCAACCCTGAGACAAGCCATCCCCTGCCTTTCCTCAGTCTACTCAATGTG
CAGACAACAAGGATGACGCACTTCCACGTACTCAATCATCAATAGTCGTTGTACTGTACA
GTTGATAAACTTAACTGGTGTGAGTGTATGAGTGTCTTGGTGTGAAAACCCAAGAATCGT
ACAGCAATGAATGCACAGACGTCTGTGTGTTCTCACCATCGTTGATTGTGTCACCCATCG
TGTGCAAGACTTGTACTGAAGTGGACAGCCTGTCCTTAGCAAGCTTAAGATGAGTGATAT
TTAATATAAAGTTTCCAATGTGTTCATTTTCTTACTGCTTTGTTATTCTGCTTTCAAAGA
ATTACATTACTGTACAGCATGGAGAAACTGCATGTCAGCTTGTCATCAGTATTTTTTTTT
TAAGTTTCCAATACTGTATTATTAATATGACTGGAATACTGCAACTGTAAAAGTTTTAAT
GATGATGCATTCATTAGTGTATAAGCTAGGCTACCCTGAGGCAGTTGCATCAATTACACA
AGGCTACCACACAGCAATCATATTGCTACTTCTTTGTTACCAATGTGTGAATCTTTATAC
CTGTAAATAAATACAAATTTCTTTTTCACATTATCTTTTCATTTTTGATGTCTAGTGTTA
GTAATACATGTAACATCTACAGTGTTTGGTGTCATATAATATTGATGTTGATACTGACAG
ATGATTCATCTTATAAACAGTTGATACAAATTTACAGTATCAATAAAAACAATACAGCAC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               544-832, gnl|bosTau2|chr27 (4595432-4595715)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               544-832, gnl|bosTau2|chr27 (4595432-4595715)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               sag (0.182715)
               

               
               mga (0.160205)
               

               
               ova (0.129132)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sag (0.182715)
               

               
               mga (0.160205)
               

               
               ova (0.129132)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

	sag (0.182715)
	mga (0.160205)
	ova (0.129132)
	tra (0.123092)
	spc (0.113366)