Non-Coding RNA Search

Ss1.1-Pig3-SRG8002G14.5

Sequence:


               
               AAAGGCGAAACTGTGGAAAGGAGAGGCCACATGAAGAGCTCCCAGTCTGGGGGTGCTGGC
AGATCTTGGGCCAAAAGGATTGAGCGGGTGGTATCGAGGCCAGGCGGGAGGAGAGGAGCA
GAGAAGGCATAGCTCCGGGGGTTTGAAACCTGGAGCCTTCAGGAGCGAATAAAACAGAAG
GATACTAATGGACCTTCCAGGATTTATTGTGGACGGATGTGGATATATTCTGTACAGAAA
CAACACACATGGAAGTGGACTGAATCCTATGTAGAAACACACACACACACATACACACAC
CCCTCAAACATTGTTATTCATTTTGTAAAATACTAGTCTTTATTTTCATTTTTTTGTAAA
ATTTAAACATCGTATGCACATAAAAAAGAAACAAGAATTAGGGGAAAATAACATTTTCCA
AATAATTATAAAAAATTGTCCTGTGTCTATGTATCTATATCTGTTTTGTATTTTTTTCTG
GTTCCAAACCAGATTTCCTGTGATTCTATACTAATAATTTTTGATATAACCCTTTGCTTC
TTATAATGAGTGCGATATATGTTGTCAAGGCTGTTCTTCAAGAATTAAAATTGAAGTGAA
AATTTAAACAAAAAATAAAAGAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGCGAAACTGTGGAAAGGAGAGGCCACATGAAGAGCTCCCAGTCTGGGGGTGCTGGC
AGATCTTGGGCCAAAAGGATTGAGCGGGTGGTATCGAGGCCAGGCGGGAGGAGAGGAGCA
GAGAAGGCATAGCTCCGGGGGTTTGAAACCTGGAGCCTTCAGGAGCGAATAAAACAGAAG
GATACTAATGGACCTTCCAGGATTTATTGTGGACGGATGTGGATATATTCTGTACAGAAA
CAACACACATGGAAGTGGACTGAATCCTATGTAGAAACACACACACACACATACACACAC
CCCTCAAACATTGTTATTCATTTTGTAAAATACTAGTCTTTATTTTCATTTTTTTGTAAA
ATTTAAACATCGTATGCACATAAAAAAGAAACAAGAATTAGGGGAAAATAACATTTTCCA
AATAATTATAAAAAATTGTCCTGTGTCTATGTATCTATATCTGTTTTGTATTTTTTTCTG
GTTCCAAACCAGATTTCCTGTGATTCTATACTAATAATTTTTGATATAACCCTTTGCTTC
TTATAATGAGTGCGATATATGTTGTCAAGGCTGTTCTTCAAGAATTAAAATTGAAGTGAA
AATTTAAACAAAAAATAAAAGAAT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               168-624, gnl|bosTau2|chr7 (58265575-58265113)
               

               
               168-624, gnl|Hg17|chr5 (92955622-92956064)
               

               
               168-624, gnl|Mm7|chr13 (75204228-75203800)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               168-624, gnl|bosTau2|chr7 (58265575-58265113)
               

               
               168-624, gnl|Hg17|chr5 (92955622-92956064)
               

               
               168-624, gnl|Mm7|chr13 (75204228-75203800)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               fco (0.314416)
               

               
               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               tes (0.207814)
               

               
               fli (0.202881)
               

               
               liv (0.146284)
               

               
               pla (0.133672)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)
               

               
               cbe (0.239234)
               

               
               ece (0.229305)
               

               
               tes (0.207814)
               

               
               fli (0.202881)
               

               
               liv (0.146284)
               

               
               pla (0.133672)

	168-624, gnl\|bosTau2\|chr7 (58265575-58265113)
	168-624, gnl\|Hg17\|chr5 (92955622-92956064)
	168-624, gnl\|Mm7\|chr13 (75204228-75203800)

	fco (0.314416)
	cbe (0.239234)
	ece (0.229305)
	tes (0.207814)
	fli (0.202881)
	liv (0.146284)
	pla (0.133672)