Ss1.1-Pig3-SRG8002I13.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTGGTTCCTGCATCCAGAGGGGCACCATGGGCTTCTGGAAGTCCCCCCCCTTCCTGATC CTCAGCATCCTGGTCCTGTACCAAGCAGGAATGCTCCATGCCGCGCCATTCAAGATGGCT TTGGGAAGCAGCTTTGATTCTGCCACACTCACGGAAGAGGAAATGTCCCTCCTACTGGTT GCAATGGTGAAGGATTATGTGCAGATGAAGGCCACTGTGCTGGAGCAGGAGACAGAGGAC TTCAGCATCACCACCCAGGAGAGATCCTGCAACACTGCCATCTGTGTGACCCACAAGATG GCAGGCTGGCTGAGCAGATCTGGGAGCGTGGTTAAGAACAACTTCATGCCCATCAACATG GGCTCCAAAGTCTTGGGCCGGCGCCGCAGACAGCCTCAGGCCTGAGCTGTGAAATGACTC TAAAAAGAAGGTCACCAAGAAGTTGAACTCAAGTTGCTTTCACTGCAAAGTTGCTTTCCC TGCAAATTAAAAGAACCAATTTGAAAAATAGCATGGAAGACACACATATATGCATGCTTC TTGCTTGAAATACAACTTTTTGCTTGAAACAAACTAAACCTAAATGCAGAATAAAATCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTGGTTCCTGCATCCAGAGGGGCACCATGGGCTTCTGGAAGTCCCCCCCCTTCCTGATC CTCAGCATCCTGGTCCTGTACCAAGCAGGAATGCTCCATGCCGCGCCATTCAAGATGGCT TTGGGAAGCAGCTTTGATTCTGCCACACTCACGGAAGAGGAAATGTCCCTCCTACTGGTT GCAATGGTGAAGGATTATGTGCAGATGAAGGCCACTGTGCTGGAGCAGGAGACAGAGGAC TTCAGCATCACCACCCAGGAGAGATCCTGCAACACTGCCATCTGTGTGACCCACAAGATG GCAGGCTGGCTGAGCAGATCTGGGAGCGTGGTTAAGAACAACTTCATGCCCATCAACATG GGCTCCAAAGTCTTGGGCCGGCGCCGCAGACAGCCTCAGGCCTGAGCTGTGAAATGACTC TAAAAAGAAGGTCACCAAGAAGTTGAACTCAAGTTGCTTTCACTGCAAAGTTGCTTTCCC TGCAAATTAAAAGAACCAATTTGAAAAATAGCATGGAAGACACACATATATGCATGCTTC TTGCTTGAAATACAACTTTTTGCTTGAAACAAACTAAACCTAAATGCAGAATAAAATCAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 242-437, gnl|bosTau2|chr15 (22524092-22523898) | |
| 242-437, gnl|Hg17|chr11 (14945980-14945789) | |
| 242-437, gnl|Mm7|chr7 (110548668-110548475) | |
| 243-421, gnl|bosTau2|chr15 (22229822-22230000) | |
| 243-421, gnl|canFam2|chr21 (41108642-41108819) | |
| 243-421, gnl|danRer3|chr7 (17331310-17331140) | |
| 243-421, gnl|dasNov1|scaffold_18067 (27297-27470) | |
| 243-421, gnl|echTel1|scaffold_322117 (1460-1636) | |
| 243-421, gnl|fr1|chrUn (51563729-51563895) | |
| 243-421, gnl|galGal2|chr5 (8062840-8063001) | |
| 243-421, gnl|hg17|chr11 (15055369-15055546) | |
| 243-421, gnl|Hg17|chr11 (15055405-15055583) | |
| 243-421, gnl|loxAfr1|scaffold_18841 (34397-34574) | |
| 243-421, gnl|mm7|chr7 (110637999-110638181) | |
| 243-421, gnl|Mm7|chr7 (110638037-110638217) | |
| 243-421, gnl|monDom2|scaffold_10 (57106804-57106643) | |
| 243-421, gnl|oryCun1|scaffold_212239 (28423-28600) | |
| 243-421, gnl|panTro1|chr9 (15250531-15250707) | |
| 243-421, gnl|rheMac2|chr14 (56869430-56869253) | |
| 243-421, gnl|rn3|chr1 (172915844-172916021) | |
| 243-421, gnl|tetNig1|chr5 (6720155-6720329) | |
| 243-421, gnl|xenTro1|scaffold_914 (121269-121127) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 242-437, gnl|bosTau2|chr15 (22524092-22523898) | |
| 242-437, gnl|Hg17|chr11 (14945980-14945789) | |
| 242-437, gnl|Mm7|chr7 (110548668-110548475) | |
| 243-421, gnl|bosTau2|chr15 (22229822-22230000) | |
| 243-421, gnl|canFam2|chr21 (41108642-41108819) | |
| 243-421, gnl|danRer3|chr7 (17331310-17331140) | |
| 243-421, gnl|dasNov1|scaffold_18067 (27297-27470) | |
| 243-421, gnl|echTel1|scaffold_322117 (1460-1636) | |
| 243-421, gnl|fr1|chrUn (51563729-51563895) | |
| 243-421, gnl|galGal2|chr5 (8062840-8063001) | |
| 243-421, gnl|hg17|chr11 (15055369-15055546) | |
| 243-421, gnl|Hg17|chr11 (15055405-15055583) | |
| 243-421, gnl|loxAfr1|scaffold_18841 (34397-34574) | |
| 243-421, gnl|mm7|chr7 (110637999-110638181) | |
| 243-421, gnl|Mm7|chr7 (110638037-110638217) | |
| 243-421, gnl|monDom2|scaffold_10 (57106804-57106643) | |
| 243-421, gnl|oryCun1|scaffold_212239 (28423-28600) | |
| 243-421, gnl|panTro1|chr9 (15250531-15250707) | |
| 243-421, gnl|rheMac2|chr14 (56869430-56869253) | |
| 243-421, gnl|rn3|chr1 (172915844-172916021) | |
| 243-421, gnl|tetNig1|chr5 (6720155-6720329) | |
| 243-421, gnl|xenTro1|scaffold_914 (121269-121127) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbe (0.239234) | |
| nje (0.16592) | |
| pgl (0.118483) |