Ss1.1-Pig3-SRG8002K07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAATGGCTGGAAAGGCAACCAGTAACAAAGAAGACATTCAGACACTACAGAGTTCTAG GAAAAGGCGGATTCGGAGAGGGTTGTGCCTGTCAAGTGCGAGCTACAGGAAAAATGTATG CCTGTAAAAAGCTGGAAAAGAAAAGAATAAAGAGGAGGAAAGGGGAAGCCATGGCCCTCA ATGAAAAAACACTCCTAGAAAAAGTGCACAGCAGGTTTGTGGTCAGCTTGTGCTACACCT ACGAAACGCGAGCGGCCCTGTGCTTGGTGCTGACCATCATGAACGGAGGCGACTTGAAGT TTCACATCTACAACCTGGGCGAGCCCGGCTTCGAGGAGCGGAGGGCGGTTTTCTACGCCG CGGAGCTGTGCTGCGGCCTCGGGGACTTGCACAGGGAGAGGATCGTGTACAGGGACCTGA AGCCCGAGAACATTCTCCTCGATGACCGCGGCCACATCCGGATTTCAGATCTTGGCTTAG CCGTGCAGATCCCGGAAGACAAGACGGTTCACGGAAGAGTCGGAACCTTGGGGTACATGG CTCCAGAAGTTCTCAATAATGAAAACTATACCTTCAGCCCGGATTGGTGGGGACTTGGCT GCCTCATCTATGAGATGATCCAGGGACATTCTCCCTTCAAAAAGTTCAAGGAGAAGGTGA GACGGGACGAAGTGGAGCGGAGAGTGAGGAAGGAGGCGGAGAAGTACTCGGAGAAGTTCT CGCAGGAGGCCAAGGCCATCTGCAGCCTGTTACTCACCAAGGACCCCAAGCAGCGTCTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAATGGCTGGAAAGGCAACCAGTAACAAAGAAGACATTCAGACACTACAGAGTTCTAG GAAAAGGCGGATTCGGAGAGGGTTGTGCCTGTCAAGTGCGAGCTACAGGAAAAATGTATG CCTGTAAAAAGCTGGAAAAGAAAAGAATAAAGAGGAGGAAAGGGGAAGCCATGGCCCTCA ATGAAAAAACACTCCTAGAAAAAGTGCACAGCAGGTTTGTGGTCAGCTTGTGCTACACCT ACGAAACGCGAGCGGCCCTGTGCTTGGTGCTGACCATCATGAACGGAGGCGACTTGAAGT TTCACATCTACAACCTGGGCGAGCCCGGCTTCGAGGAGCGGAGGGCGGTTTTCTACGCCG CGGAGCTGTGCTGCGGCCTCGGGGACTTGCACAGGGAGAGGATCGTGTACAGGGACCTGA AGCCCGAGAACATTCTCCTCGATGACCGCGGCCACATCCGGATTTCAGATCTTGGCTTAG CCGTGCAGATCCCGGAAGACAAGACGGTTCACGGAAGAGTCGGAACCTTGGGGTACATGG CTCCAGAAGTTCTCAATAATGAAAACTATACCTTCAGCCCGGATTGGTGGGGACTTGGCT GCCTCATCTATGAGATGATCCAGGGACATTCTCCCTTCAAAAAGTTCAAGGAGAAGGTGA GACGGGACGAAGTGGAGCGGAGAGTGAGGAAGGAGGCGGAGAAGTACTCGGAGAAGTTCT CGCAGGAGGCCAAGGCCATCTGCAGCCTGTTACTCACCAAGGACCCCAAGCAGCGTCTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 221-413, gnl|bosTau2|chr26 (25777900-25777708) | |
| 221-413, gnl|canFam2|chr28 (32618799-32619001) | |
| 221-413, gnl|danRer3|chr17 (25511011-25511213) | |
| 221-413, gnl|dasNov1|scaffold_2728 (67284-67082) | |
| 221-413, gnl|echTel1|scaffold_303590 (4792-4590) | |
| 221-413, gnl|fr1|chrUn (282992710-282992509) | |
| 221-413, gnl|galGal2|chr6 (29201326-29201528) | |
| 221-413, gnl|hg17|chr10 (121186147-121186349) | |
| 221-413, gnl|Hg17|chr10 (121186152-121186344) | |
| 221-413, gnl|loxAfr1|scaffold_9632 (20994-20792) | |
| 221-413, gnl|mm7|chr19 (60999347-60999549) | |
| 221-413, gnl|Mm7|chr19 (60999352-60999544) | |
| 221-413, gnl|monDom2|scaffold_14 (40901130-40900928) | |
| 221-413, gnl|oryCun1|scaffold_137334 (20573-20775) | |
| 221-413, gnl|panTro1|chr8 (123454406-123454608) | |
| 221-413, gnl|rheMac2|chr9 (119060464-119060666) | |
| 221-413, gnl|rn3|chr1 (267888061-267888263) | |
| 221-413, gnl|tetNig1|chr7 (10810092-10810288) | |
| 221-413, gnl|xenTro1|scaffold_337 (841596-841798) | |
| 540-775, gnl|bosTau2|chr26 (25770763-25770528) | |
| 540-775, gnl|Hg17|chr10 (121193045-121193279) | |
| 540-775, gnl|Mm7|chr19 (61005774-61006009) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 221-413, gnl|bosTau2|chr26 (25777900-25777708) | |
| 221-413, gnl|canFam2|chr28 (32618799-32619001) | |
| 221-413, gnl|danRer3|chr17 (25511011-25511213) | |
| 221-413, gnl|dasNov1|scaffold_2728 (67284-67082) | |
| 221-413, gnl|echTel1|scaffold_303590 (4792-4590) | |
| 221-413, gnl|fr1|chrUn (282992710-282992509) | |
| 221-413, gnl|galGal2|chr6 (29201326-29201528) | |
| 221-413, gnl|hg17|chr10 (121186147-121186349) | |
| 221-413, gnl|Hg17|chr10 (121186152-121186344) | |
| 221-413, gnl|loxAfr1|scaffold_9632 (20994-20792) | |
| 221-413, gnl|mm7|chr19 (60999347-60999549) | |
| 221-413, gnl|Mm7|chr19 (60999352-60999544) | |
| 221-413, gnl|monDom2|scaffold_14 (40901130-40900928) | |
| 221-413, gnl|oryCun1|scaffold_137334 (20573-20775) | |
| 221-413, gnl|panTro1|chr8 (123454406-123454608) | |
| 221-413, gnl|rheMac2|chr9 (119060464-119060666) | |
| 221-413, gnl|rn3|chr1 (267888061-267888263) | |
| 221-413, gnl|tetNig1|chr7 (10810092-10810288) | |
| 221-413, gnl|xenTro1|scaffold_337 (841596-841798) | |
| 540-775, gnl|bosTau2|chr26 (25770763-25770528) | |
| 540-775, gnl|Hg17|chr10 (121193045-121193279) | |
| 540-775, gnl|Mm7|chr19 (61005774-61006009) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ese (0.126502) | |
| jca (0.11396) |