Non-Coding RNA Search

Ss1.1-Pig3-SRG8002M07.3

Sequence:


               
               AAGCAGCCAGAGAACTCTTTGCTATGTGACCCGTCGCTGGTGGATGAGATTTTCAACCAG
ATCCCGGAGCTCCTGGAGCACCACGAGCAGTTCCTGGAGCAGGTGCGGCACTGCGTGCAG
ACCTGGCATGCCCAGCAGAAGGTGGGGGACCTGCTTGTCCAGTCGGTGAGTGGCCCTGCT
CTCCATACCACAGCCCCCGCAACTCGAGCTCCCCTGGGAGAACCCAGATGCTGCCAAGGA
GCCCTCCTCCCCTCTGGAGACCGACTCTGATCCCTGATCCAGCCCAGAACTTGAGCAGAC
CCTGGCACTGACCCCAGCCCCTGGATTGACCTGAACCTGGATGCCCAGCCCCAACCAGGC
ACTGACCTGATCTTGAACCCAACCCCAGCTGCTGGCACTGCCCCGACCCTCCCGAGTCCC
AACCCTGAGCTGGCACTGCCTGTGACCCGTGACCTCAAACAGATGCTGGTACTGGCCTCA
AACCCCGCCTTAACCTGACCCTAAGCAATTGCCCTGATCCTGACCCTGGACTTGGCCTTG
TTGACACTGATCTAGTCTTGACCAGCTCTTTTCTACATCAGGCATTTTAACCATAATGGC
CATTCGACAGGTATTATGTGAAAAGCATTCTCAACACATTATGCATAAATCGACACCTCT
AAGGGAGAAGGTACAGTTGTGCCCAAGTTTAAAGTGGATGACTCGGCCGCGTAGAGAGCA
GGTGACCCGATGAAAGTCATAGTTAGGACTGGCCGGGGGAGGGTTCGGCCCCAGGAATCC
CGGCTCCTCCGGGGCCCGTGCGCCACCCTGCCCGCTGTCCCTTCCCCCAGGCCAGGCCCT
CGCCTTTTCAAGGTCCCACAGTAGAGACGGGGACATTAAGAAAGGTACTGGCTCCAAAAT
TCAGAAAGAACTGCAGCCACAAAACTAATAAATGTCCAACTAAACGTCCGTAAACATAAC
AGGGCATTTTCTTTAGGCGTTACATTTAGTACCCACTGATACCAGCTTAACTGCGTTTTT
AAAGTTTCATTTGCATTTTGCTATTTTTCCAGAGTTCCCAAAAAAAGCATGATGATGAGC
AATAAATCTTCGCGAAACACAAACTCAGGGCTTACTCAGACCCAAATAAGTTGAAGGATA
AAATTGTAAAACTCCTTCCAAAAATTTTACTGCTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCAGCCAGAGAACTCTTTGCTATGTGACCCGTCGCTGGTGGATGAGATTTTCAACCAG
ATCCCGGAGCTCCTGGAGCACCACGAGCAGTTCCTGGAGCAGGTGCGGCACTGCGTGCAG
ACCTGGCATGCCCAGCAGAAGGTGGGGGACCTGCTTGTCCAGTCGGTGAGTGGCCCTGCT
CTCCATACCACAGCCCCCGCAACTCGAGCTCCCCTGGGAGAACCCAGATGCTGCCAAGGA
GCCCTCCTCCCCTCTGGAGACCGACTCTGATCCCTGATCCAGCCCAGAACTTGAGCAGAC
CCTGGCACTGACCCCAGCCCCTGGATTGACCTGAACCTGGATGCCCAGCCCCAACCAGGC
ACTGACCTGATCTTGAACCCAACCCCAGCTGCTGGCACTGCCCCGACCCTCCCGAGTCCC
AACCCTGAGCTGGCACTGCCTGTGACCCGTGACCTCAAACAGATGCTGGTACTGGCCTCA
AACCCCGCCTTAACCTGACCCTAAGCAATTGCCCTGATCCTGACCCTGGACTTGGCCTTG
TTGACACTGATCTAGTCTTGACCAGCTCTTTTCTACATCAGGCATTTTAACCATAATGGC
CATTCGACAGGTATTATGTGAAAAGCATTCTCAACACATTATGCATAAATCGACACCTCT
AAGGGAGAAGGTACAGTTGTGCCCAAGTTTAAAGTGGATGACTCGGCCGCGTAGAGAGCA
GGTGACCCGATGAAAGTCATAGTTAGGACTGGCCGGGGGAGGGTTCGGCCCCAGGAATCC
CGGCTCCTCCGGGGCCCGTGCGCCACCCTGCCCGCTGTCCCTTCCCCCAGGCCAGGCCCT
CGCCTTTTCAAGGTCCCACAGTAGAGACGGGGACATTAAGAAAGGTACTGGCTCCAAAAT
TCAGAAAGAACTGCAGCCACAAAACTAATAAATGTCCAACTAAACGTCCGTAAACATAAC
AGGGCATTTTCTTTAGGCGTTACATTTAGTACCCACTGATACCAGCTTAACTGCGTTTTT
AAAGTTTCATTTGCATTTTGCTATTTTTCCAGAGTTCCCAAAAAAAGCATGATGATGAGC
AATAAATCTTCGCGAAACACAAACTCAGGGCTTACTCAGACCCAAATAAGTTGAAGGATA
AAATTGTAAAACTCCTTCCAAAAATTTTACTGCTAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-404, gnl|bosTau2|chr15 (41705792-41706190)
               

               
               1-404, gnl|Hg17|chr11 (72741541-72741902)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-404, gnl|bosTau2|chr15 (41705792-41706190)
               

               
               1-404, gnl|Hg17|chr11 (72741541-72741902)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               jca (0.11396)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)

	1-404, gnl\|bosTau2\|chr15 (41705792-41706190)
	1-404, gnl\|Hg17\|chr11 (72741541-72741902)