Non-Coding RNA Search

Ss1.1-Pig3-SRG8002N04.3

Sequence:


               
               GGCTGGGCCTGGGAAGCCAGGAGCAGGGGAGAACTGAATTTTGTGTTTCTGTCTAATGCA
TCTGTGTGCCTTATCGTCCAACAGTTCAGGGATGGTGGGTGTTTTGTGAATGTCGCCTAA
TTTTTCTCAGGTGTCTTTGGTGATGCTCCAAGTCACCAAATTTGGCTGACTTCTGCATTT
CACTGTTTGATGGAAGGAAAATAGCATATCGAGTAGTCATGTGTCAGGAGTGGAGGTCTT
AGATGAAAAAGGCCTTGGAAGGTGTGGTAGCAGGAGAAAGGGACCCAGTGCTTAGCTTAT
TTACTCAGACTTGCTTCACTCCTCCAATGTTCAGTACAATAGCTGATTAAAGACGTTTAA
AAAAACTGGGCCTTAACTTCTTCGCCACCTAAAATCTGTTCCTCAGGAGTATTTTGAGAA
GGAGCCTGTGTCTTTAACTTCACTGAGAAACAGTCTATAGTGTTTATACCATGGATTTGG
GAGTTAGATGTATTTGGTTCAGATTTCTAGCTTTGCTACTTACCAGCTGGGTTTGACCTT
GTTGATTGACTTGACCTCTCTGAGCCTCAAGTTTCCTCAACTGTAATGCTATGTGTATAG
GGGAAGGGGGGTGTTGAAAATGTCTACCTCAGGGCTGATGAATTGATTGAAACAATGTTT
GTAAAGCTTTAGCACAGTGCCTGGAAAGCACTTAATAAATGGCTGTGGTGGTGGTTGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGGGCCTGGGAAGCCAGGAGCAGGGGAGAACTGAATTTTGTGTTTCTGTCTAATGCA
TCTGTGTGCCTTATCGTCCAACAGTTCAGGGATGGTGGGTGTTTTGTGAATGTCGCCTAA
TTTTTCTCAGGTGTCTTTGGTGATGCTCCAAGTCACCAAATTTGGCTGACTTCTGCATTT
CACTGTTTGATGGAAGGAAAATAGCATATCGAGTAGTCATGTGTCAGGAGTGGAGGTCTT
AGATGAAAAAGGCCTTGGAAGGTGTGGTAGCAGGAGAAAGGGACCCAGTGCTTAGCTTAT
TTACTCAGACTTGCTTCACTCCTCCAATGTTCAGTACAATAGCTGATTAAAGACGTTTAA
AAAAACTGGGCCTTAACTTCTTCGCCACCTAAAATCTGTTCCTCAGGAGTATTTTGAGAA
GGAGCCTGTGTCTTTAACTTCACTGAGAAACAGTCTATAGTGTTTATACCATGGATTTGG
GAGTTAGATGTATTTGGTTCAGATTTCTAGCTTTGCTACTTACCAGCTGGGTTTGACCTT
GTTGATTGACTTGACCTCTCTGAGCCTCAAGTTTCCTCAACTGTAATGCTATGTGTATAG
GGGAAGGGGGGTGTTGAAAATGTCTACCTCAGGGCTGATGAATTGATTGAAACAATGTTT
GTAAAGCTTTAGCACAGTGCCTGGAAAGCACTTAATAAATGGCTGTGGTGGTGGTTGTTA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               2-719, gnl|bosTau2|chr26 (12921312-12920578)
               

               
               2-719, gnl|Hg17|chr10 (102302891-102303664)
               

               
               2-719, gnl|Mm7|chr19 (44469470-44470145)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-719, gnl|bosTau2|chr26 (12921312-12920578)
               

               
               2-719, gnl|Hg17|chr10 (102302891-102303664)
               

               
               2-719, gnl|Mm7|chr19 (44469470-44470145)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               sme (0.305437)
               

               
               fcc (0.197785)
               

               
               rec (0.17307)
               

               
               cli (0.152812)
               

               
               jca (0.11396)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sme (0.305437)
               

               
               fcc (0.197785)
               

               
               rec (0.17307)
               

               
               cli (0.152812)
               

               
               jca (0.11396)

	2-719, gnl\|bosTau2\|chr26 (12921312-12920578)
	2-719, gnl\|Hg17\|chr10 (102302891-102303664)
	2-719, gnl\|Mm7\|chr19 (44469470-44470145)

	sme (0.305437)
	fcc (0.197785)
	rec (0.17307)
	cli (0.152812)
	jca (0.11396)