Ss1.1-Pig3-SRG8003D03.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTTTGTCCAGTGCCAGACAGTTACACTTTGAAGGAAGCAGAATTGAAGCCGGGGAGTT TATTGGGCCTCTGTCCTGGAAAAGCACCGACATCTTCTCAGCTATTCCTGTTTTTTGCTG TCGGGAGTGATGTTCAGCCTGGGACAGATATGGAGATCATAGTGGAAGAAACAGGATCTG TAAGAGGTTGTTTAAAGATAATGCTGGAGAAATCTGGCCTGTCAGGAGGCACATGGCATT TACGAAAAATGGATTGGTGCTTTGAAGCTGGGGAGCCTTTATGTGAAGAAGATGCAACAC TGAAAGAGCTTATGATATGTTCTGGAGATACCTTGCTTTTAGTTGAAGGGAAACTTCCTC CTCTGGGCTTCCTGAAGGTGCCCATCTGGTGGTACCAGCCACGGGGTCCCTGGCGTCACT GGCATCATCAGGACCAGATGGACTGTACCTTTGCTCAAGGTGCTCCTGGTGACAGGCAGG CGGACGTTTCTCTCCACTACTTGGGAGACATTGAAATCTCAGAAGATGCCACCCTGGGGG AGCTGAAGTCTCAGGCCCTGACCTTGCCGAACTTCTCGGAGTTTCCCGTCCCTTCCCCAG CCTTCCTCAGAGCCTGGACGGTGGAGTACAAGCGGCCCGGCAGACTCTTACGCGTCCACC AGCAGCAGCTCAAGGAATATAAGTTGGGGAAGAGAACTGAGATCTGCTTAGAGCCCCTTC AGAAAGAAGAACACTTGGGCCCCCAGGATGTGCTGCTGAGGACACAGATGCGCCTCCCTG GCAAGAGGGCATATGCTCTGCCCGTGGACTTAGTGTGGGACACGGCCCGAGGCTGGACGG CTGGCTCCCTGAGGCAGCGAGTAGCCAATTTCTGTTCTCTTCCTGTGGAGAAAATCGAAA TTGCCAAATACTTTCCTGAAAAGTTTGAGTGGCTTCCAATATCTAGCTGGAACCAGCAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTTTGTCCAGTGCCAGACAGTTACACTTTGAAGGAAGCAGAATTGAAGCCGGGGAGTT TATTGGGCCTCTGTCCTGGAAAAGCACCGACATCTTCTCAGCTATTCCTGTTTTTTGCTG TCGGGAGTGATGTTCAGCCTGGGACAGATATGGAGATCATAGTGGAAGAAACAGGATCTG TAAGAGGTTGTTTAAAGATAATGCTGGAGAAATCTGGCCTGTCAGGAGGCACATGGCATT TACGAAAAATGGATTGGTGCTTTGAAGCTGGGGAGCCTTTATGTGAAGAAGATGCAACAC TGAAAGAGCTTATGATATGTTCTGGAGATACCTTGCTTTTAGTTGAAGGGAAACTTCCTC CTCTGGGCTTCCTGAAGGTGCCCATCTGGTGGTACCAGCCACGGGGTCCCTGGCGTCACT GGCATCATCAGGACCAGATGGACTGTACCTTTGCTCAAGGTGCTCCTGGTGACAGGCAGG CGGACGTTTCTCTCCACTACTTGGGAGACATTGAAATCTCAGAAGATGCCACCCTGGGGG AGCTGAAGTCTCAGGCCCTGACCTTGCCGAACTTCTCGGAGTTTCCCGTCCCTTCCCCAG CCTTCCTCAGAGCCTGGACGGTGGAGTACAAGCGGCCCGGCAGACTCTTACGCGTCCACC AGCAGCAGCTCAAGGAATATAAGTTGGGGAAGAGAACTGAGATCTGCTTAGAGCCCCTTC AGAAAGAAGAACACTTGGGCCCCCAGGATGTGCTGCTGAGGACACAGATGCGCCTCCCTG GCAAGAGGGCATATGCTCTGCCCGTGGACTTAGTGTGGGACACGGCCCGAGGCTGGACGG CTGGCTCCCTGAGGCAGCGAGTAGCCAATTTCTGTTCTCTTCCTGTGGAGAAAATCGAAA TTGCCAAATACTTTCCTGAAAAGTTTGAGTGGCTTCCAATATCTAGCTGGAACCAGCAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 50 entry(ies) | More info |
| Aligned organism(s): 50 entry(ies) | Help | Less info |
| 1-104, gnl|bosTau2|chr3 (80458435-80458536) | |
| 1-104, gnl|canFam2|chr13 (34175592-34175652) | |
| 1-104, gnl|canFam2|chr25 (47991574-47992199) | |
| 1-104, gnl|dasNov1|scaffold_81027 (2616-2721) | |
| 1-104, gnl|dasNov1|scaffold_81027 (2620-3244) | |
| 1-104, gnl|echTel1|scaffold_208237 (3718-3612) | |
| 1-104, gnl|echTel1|scaffold_208237 (3716-3174) | |
| 1-104, gnl|hg17|chr2 (234202337-234202986) | |
| 1-104, gnl|Hg17|chr2 (234202453-234202352) | |
| 1-104, gnl|hg17|chr8 (136208305-136208411) | |
| 1-104, gnl|loxAfr1|scaffold_29537 (26718-26612) | |
| 1-104, gnl|loxAfr1|scaffold_29537 (26715-26058) | |
| 1-104, gnl|mm7|chr1 (87871140-87871238) | |
| 1-104, gnl|mm7|chr1 (87871139-87871829) | |
| 1-104, gnl|Mm7|chr1 (87871250-87871149) | |
| 1-104, gnl|panTro1|chr13 (124937893-124938541) | |
| 1-104, gnl|panTro1|chr7 (139209751-139209857) | |
| 1-104, gnl|rheMac2|chr12 (97411732-97412379) | |
| 1-104, gnl|rheMac2|chr8 (137685487-137685593) | |
| 1-104, gnl|rn3|chr9 (87102755-87102853) | |
| 1-104, gnl|rn3|chr9 (87102754-87103428) | |
| 553-674, gnl|bosTau2|chr3 (80476141-80476259) | |
| 553-674, gnl|canFam2|chr25 (47976906-47977051) | |
| 553-674, gnl|danRer3|chr10 (21192878-21192741) | |
| 553-674, gnl|echTel1|scaffold_208237 (13989-13843) | |
| 553-674, gnl|galGal2|chr7 (5798940-5798784) | |
| 553-674, gnl|hg17|chr2 (234179989-234180138) | |
| 553-674, gnl|Hg17|chr2 (234180131-234180010) | |
| 553-674, gnl|mm7|chr1 (87855965-87856108) | |
| 553-674, gnl|Mm7|chr1 (87856102-87855981) | |
| 553-674, gnl|monDom2|scaffold_190 (450053-450202) | |
| 553-674, gnl|panTro1|chr13 (124914752-124914901) | |
| 553-674, gnl|rheMac2|chr12 (97387033-97387190) | |
| 553-674, gnl|rn3|chr9 (87087809-87087953) | |
| 739-950, gnl|bosTau2|chr3 (80482965-80483176) | |
| 739-950, gnl|canFam2|chr25 (47971901-47972130) | |
| 739-950, gnl|danRer3|chr10 (21195083-21194856) | |
| 739-950, gnl|dasNov1|scaffold_41671 (14669-14440) | |
| 739-950, gnl|echTel1|scaffold_208237 (17841-17612) | |
| 739-950, gnl|galGal2|chr7 (5799817-5799587) | |
| 739-950, gnl|hg17|chr2 (234176407-234176636) | |
| 739-950, gnl|Hg17|chr2 (234176624-234176413) | |
| 739-950, gnl|loxAfr1|scaffold_5848 (77573-77802) | |
| 739-950, gnl|mm7|chr1 (87853798-87854024) | |
| 739-950, gnl|Mm7|chr1 (87854012-87853801) | |
| 739-950, gnl|monDom2|scaffold_190 (446543-446772) | |
| 739-950, gnl|panTro1|chr13 (124911169-124911398) | |
| 739-950, gnl|rheMac2|chr12 (97380504-97380733) | |
| 739-950, gnl|rn3|chr9 (87085605-87085831) | |
| 739-950, gnl|tetNig1|chr10 (8246402-8246620) |
| Aligned organism(s): 50 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-104, gnl|bosTau2|chr3 (80458435-80458536) | |
| 1-104, gnl|canFam2|chr13 (34175592-34175652) | |
| 1-104, gnl|canFam2|chr25 (47991574-47992199) | |
| 1-104, gnl|dasNov1|scaffold_81027 (2616-2721) | |
| 1-104, gnl|dasNov1|scaffold_81027 (2620-3244) | |
| 1-104, gnl|echTel1|scaffold_208237 (3718-3612) | |
| 1-104, gnl|echTel1|scaffold_208237 (3716-3174) | |
| 1-104, gnl|hg17|chr2 (234202337-234202986) | |
| 1-104, gnl|Hg17|chr2 (234202453-234202352) | |
| 1-104, gnl|hg17|chr8 (136208305-136208411) | |
| 1-104, gnl|loxAfr1|scaffold_29537 (26718-26612) | |
| 1-104, gnl|loxAfr1|scaffold_29537 (26715-26058) | |
| 1-104, gnl|mm7|chr1 (87871140-87871238) | |
| 1-104, gnl|mm7|chr1 (87871139-87871829) | |
| 1-104, gnl|Mm7|chr1 (87871250-87871149) | |
| 1-104, gnl|panTro1|chr13 (124937893-124938541) | |
| 1-104, gnl|panTro1|chr7 (139209751-139209857) | |
| 1-104, gnl|rheMac2|chr12 (97411732-97412379) | |
| 1-104, gnl|rheMac2|chr8 (137685487-137685593) | |
| 1-104, gnl|rn3|chr9 (87102755-87102853) | |
| 1-104, gnl|rn3|chr9 (87102754-87103428) | |
| 553-674, gnl|bosTau2|chr3 (80476141-80476259) | |
| 553-674, gnl|canFam2|chr25 (47976906-47977051) | |
| 553-674, gnl|danRer3|chr10 (21192878-21192741) | |
| 553-674, gnl|echTel1|scaffold_208237 (13989-13843) | |
| 553-674, gnl|galGal2|chr7 (5798940-5798784) | |
| 553-674, gnl|hg17|chr2 (234179989-234180138) | |
| 553-674, gnl|Hg17|chr2 (234180131-234180010) | |
| 553-674, gnl|mm7|chr1 (87855965-87856108) | |
| 553-674, gnl|Mm7|chr1 (87856102-87855981) | |
| 553-674, gnl|monDom2|scaffold_190 (450053-450202) | |
| 553-674, gnl|panTro1|chr13 (124914752-124914901) | |
| 553-674, gnl|rheMac2|chr12 (97387033-97387190) | |
| 553-674, gnl|rn3|chr9 (87087809-87087953) | |
| 739-950, gnl|bosTau2|chr3 (80482965-80483176) | |
| 739-950, gnl|canFam2|chr25 (47971901-47972130) | |
| 739-950, gnl|danRer3|chr10 (21195083-21194856) | |
| 739-950, gnl|dasNov1|scaffold_41671 (14669-14440) | |
| 739-950, gnl|echTel1|scaffold_208237 (17841-17612) | |
| 739-950, gnl|galGal2|chr7 (5799817-5799587) | |
| 739-950, gnl|hg17|chr2 (234176407-234176636) | |
| 739-950, gnl|Hg17|chr2 (234176624-234176413) | |
| 739-950, gnl|loxAfr1|scaffold_5848 (77573-77802) | |
| 739-950, gnl|mm7|chr1 (87853798-87854024) | |
| 739-950, gnl|Mm7|chr1 (87854012-87853801) | |
| 739-950, gnl|monDom2|scaffold_190 (446543-446772) | |
| 739-950, gnl|panTro1|chr13 (124911169-124911398) | |
| 739-950, gnl|rheMac2|chr12 (97380504-97380733) | |
| 739-950, gnl|rn3|chr9 (87085605-87085831) | |
| 739-950, gnl|tetNig1|chr10 (8246402-8246620) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| che (0.136314) |