Non-Coding RNA Search

Ss1.1-Pig3-SRG8003F13.3

Sequence:


               
               GGTGAGGTTGAGCATGCGAGACAGCTGCAGGCGCTTCTCTTTGTTGATGTACACACTGAA
GAAGAACTCCCGCTCCAGCTCCCGGATCTGGTACTTGGTGTAGGGGCAGCGCTTTTTTCG
GGTTCGCTGGCCACTGGAGCCGCCGGCCTTGTCCTCAGTGTGGCCGGAAGACGACTCGGG
GCTGCTGCTGCTCTCGGGGCGCCGCCGCCGCTCCTTTTCCTCCGCCGCCGCCGCCGCCTC
CCGGCAGCCGCCGGCGCCGCTGTCCGAACTTGAAGTTGCCGGCGTGCCCGTGGCCGCTGC
CGCCGCCGCCGCCGCCGCCGCCGCGGAGGTCGCCGCGGCCGCCGGGGCCCCCTTCTCGGT
GCTCTTGTCCCCGGGGTAGTCGGAGGAGGCGAGGTTTTCCGGGGTGCCGTAGGCCGTCTC
GAAAAACTGGTCGAAAGCCTGGGGCAGGACGCCGTTTCTGCCCACGGTGCTATAGAAATT
GGACGAGACGGCGGGGGTGGGGTGGTGGTAGACGTTGGCCGAGCTCTTGGCCAGCACGTC
GCCAGGCACGCCGGCCGCGCTGGGCGCCTGCAGGCAGTCTCTGTGCACGAGCTCCTCCGC
GGAGTAGCAGTGGGCCAGATTGCCGCGGGGGTGCCATTTAGTGGCGGGCTCAATGGCGTA
TTCTCTGAAGGTCACTTCGCGCACGGGTTGGACCTGGGGCTCTCCGCAAGAGTAGGAGTA
TGTCATTGGGCGCACTGCAGCTGCTCTTTGAAGCGGAGAAGGGAGGCTGGAGAAATCTGG
ACCCGAGACGTAGTAAGTACAACTTGGCAAATACATGTTAGAGGAGCAGGGACCACGCTC
ATCAAAATCCATCATTGGGCTACCTTGGGCTCTCCGCAGTAGCCGAGCTTAACATGATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGAGGTTGAGCATGCGAGACAGCTGCAGGCGCTTCTCTTTGTTGATGTACACACTGAA
GAAGAACTCCCGCTCCAGCTCCCGGATCTGGTACTTGGTGTAGGGGCAGCGCTTTTTTCG
GGTTCGCTGGCCACTGGAGCCGCCGGCCTTGTCCTCAGTGTGGCCGGAAGACGACTCGGG
GCTGCTGCTGCTCTCGGGGCGCCGCCGCCGCTCCTTTTCCTCCGCCGCCGCCGCCGCCTC
CCGGCAGCCGCCGGCGCCGCTGTCCGAACTTGAAGTTGCCGGCGTGCCCGTGGCCGCTGC
CGCCGCCGCCGCCGCCGCCGCCGCGGAGGTCGCCGCGGCCGCCGGGGCCCCCTTCTCGGT
GCTCTTGTCCCCGGGGTAGTCGGAGGAGGCGAGGTTTTCCGGGGTGCCGTAGGCCGTCTC
GAAAAACTGGTCGAAAGCCTGGGGCAGGACGCCGTTTCTGCCCACGGTGCTATAGAAATT
GGACGAGACGGCGGGGGTGGGGTGGTGGTAGACGTTGGCCGAGCTCTTGGCCAGCACGTC
GCCAGGCACGCCGGCCGCGCTGGGCGCCTGCAGGCAGTCTCTGTGCACGAGCTCCTCCGC
GGAGTAGCAGTGGGCCAGATTGCCGCGGGGGTGCCATTTAGTGGCGGGCTCAATGGCGTA
TTCTCTGAAGGTCACTTCGCGCACGGGTTGGACCTGGGGCTCTCCGCAAGAGTAGGAGTA
TGTCATTGGGCGCACTGCAGCTGCTCTTTGAAGCGGAGAAGGGAGGCTGGAGAAATCTGG
ACCCGAGACGTAGTAAGTACAACTTGGCAAATACATGTTAGAGGAGCAGGGACCACGCTC
ATCAAAATCCATCATTGGGCTACCTTGGGCTCTCCGCAGTAGCCGAGCTTAACATGATTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               HXA11_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               HXA11_HUMAN

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               133-900, gnl|bosTau2|chr4 (40157848-40157084)
               

               
               133-900, gnl|Hg17|chr7 (26997293-26998051)
               

               
               133-900, gnl|Mm7|chr6 (52208378-52209133)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               133-900, gnl|bosTau2|chr4 (40157848-40157084)
               

               
               133-900, gnl|Hg17|chr7 (26997293-26998051)
               

               
               133-900, gnl|Mm7|chr6 (52208378-52209133)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	133-900, gnl\|bosTau2\|chr4 (40157848-40157084)
	133-900, gnl\|Hg17\|chr7 (26997293-26998051)
	133-900, gnl\|Mm7\|chr6 (52208378-52209133)