Non-Coding RNA Search

Ss1.1-Pig3-SRG8003K05.3

Sequence:


               
               CCTGGATCCTACGAAAGGACCCATAAAGAAAATTTTTGAGCAGCCTCTCTGGGTGAAGCT
TGTCGAACTCATAGAAAGACGCTTTTCCAGGCAAGAGGGAGAAAAAAATGCTGCAGAATT
CCAGCGCTGGGATGTATAGTCTCTGATCATAACATGATTCATTGCTTTTTGCCGGGCCTG
GGGGGCATTGGAAACAACACTTTCTCATCTTTCTGGCTTCCCTCTCTGAGTTTTGGTTTT
CTATTCCTTGGATTTGATGCGGGTCTTGGGGCAAAGCTCATCTGGTCTGGGTGTCCTTGC
TTGTCAACAGCCCTGTATGCGTTCGGGCAAAGCATTATACGTCGCTTCCTCCCCACTCCC
CTTTGATCGAAGGCTATCGTATGTGTTGTCTGGGAACATATCGTGAGCCGCTAGCGCCTG
GGGCAGTGACTGTAAAACGAATTCTAAACCCAGTCTGAACTCGCCACGGCGACTTCCCCG
GCCCCCAACACCATGCAGACAGAAGCGAGGTTATGTGTGTCACCAAGTTAAAAATCGCCC
GCCGTGATGCGTTGGGGTGGGATTAGGGCCGAATTCGGACTATGCGGGGAGAGGATGGAA
AAACCTCTACCTGCCCACTCTGGTCTCTATCTTTCTTTCCCGAGCAGGTTTGGCGGAGAA
GGCAGAGGGTGCGCCCCCAGTCGCTGCCTGGCTGTGCGCGGGCGCCGGAGTTTGGACCGA
GACAAAGACGGGAGCTGTCCGCGGTGCTGACCCTGCCGCGCCGCCACAGGGGCAAACGGG
ATCCTGTAACCTGCCCTCTCCTTCTGTACGCCCTCGTTCTATTTCTCCTTCACTCTGAGA
TTCTTGCCCTCTCCTAAATTTATTTCCCCCTTTGTCCTTTCTTGGAACTCTCGTCCTGTA
CACAGGTATATGTATATCAAAAAACAAAGCAATTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGGATCCTACGAAAGGACCCATAAAGAAAATTTTTGAGCAGCCTCTCTGGGTGAAGCT
TGTCGAACTCATAGAAAGACGCTTTTCCAGGCAAGAGGGAGAAAAAAATGCTGCAGAATT
CCAGCGCTGGGATGTATAGTCTCTGATCATAACATGATTCATTGCTTTTTGCCGGGCCTG
GGGGGCATTGGAAACAACACTTTCTCATCTTTCTGGCTTCCCTCTCTGAGTTTTGGTTTT
CTATTCCTTGGATTTGATGCGGGTCTTGGGGCAAAGCTCATCTGGTCTGGGTGTCCTTGC
TTGTCAACAGCCCTGTATGCGTTCGGGCAAAGCATTATACGTCGCTTCCTCCCCACTCCC
CTTTGATCGAAGGCTATCGTATGTGTTGTCTGGGAACATATCGTGAGCCGCTAGCGCCTG
GGGCAGTGACTGTAAAACGAATTCTAAACCCAGTCTGAACTCGCCACGGCGACTTCCCCG
GCCCCCAACACCATGCAGACAGAAGCGAGGTTATGTGTGTCACCAAGTTAAAAATCGCCC
GCCGTGATGCGTTGGGGTGGGATTAGGGCCGAATTCGGACTATGCGGGGAGAGGATGGAA
AAACCTCTACCTGCCCACTCTGGTCTCTATCTTTCTTTCCCGAGCAGGTTTGGCGGAGAA
GGCAGAGGGTGCGCCCCCAGTCGCTGCCTGGCTGTGCGCGGGCGCCGGAGTTTGGACCGA
GACAAAGACGGGAGCTGTCCGCGGTGCTGACCCTGCCGCGCCGCCACAGGGGCAAACGGG
ATCCTGTAACCTGCCCTCTCCTTCTGTACGCCCTCGTTCTATTTCTCCTTCACTCTGAGA
TTCTTGCCCTCTCCTAAATTTATTTCCCCCTTTGTCCTTTCTTGGAACTCTCGTCCTGTA
CACAGGTATATGTATATCAAAAAACAAAGCAATTGA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               38-936, gnl|bosTau2|chr17 (38096191-38097081)
               

               
               38-936, gnl|Hg17|chr12 (112380083-112381003)
               

               
               38-936, gnl|Mm7|chr5 (119658966-119657917)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-936, gnl|bosTau2|chr17 (38096191-38097081)
               

               
               38-936, gnl|Hg17|chr12 (112380083-112381003)
               

               
               38-936, gnl|Mm7|chr5 (119658966-119657917)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	38-936, gnl\|bosTau2\|chr17 (38096191-38097081)
	38-936, gnl\|Hg17\|chr12 (112380083-112381003)
	38-936, gnl\|Mm7\|chr5 (119658966-119657917)