Ss1.1-Pig3-SRG8003M20.3
|
ATGTCCAGTGTGTGCGAAAAGAGGCCCCTTTGGCAAAGAAAGTGCCTGAATGTCAGCTCT
GGGAGAAACTGCAGAATTCAAAATGTGTTTGTAAAATGCCCTATGAATGCGGATCTTCCT
TAGACGTGTGCGCTCGAGATGAGAGAAGCAAAAGGATCCTGCGACTGACAGTTTGCAAGA
TGCATGTTCTCCAATGTCAGGGTAGAAATTACACTCTTTCTGTTGGGGAGACCTGTACTC
TGCCTGGCTCCGCTGAGAAAGCTTGCGGTGCATGTCCACTCTGGGAGAAATGTGATGCCC
AAAGCAGCAAATGTGTCTGCAGAGCCGCCTCGGAGTGCGAGGAAGCGGGGTTCCGCGTCT
GCGTGGAGGTGAACGGCAGGGAGCAGACGATGACCGAGTGTGAGGCCGGCGTCCTGAGAT
GCCTAGGACTGAGCATCACTGTCACCAGCATCAGGCCCTGCGCGCCCGAAGCCCCGTAGC
AATCCCGGCGCGCACAACCTGCCACGTAGACAGCTTCTCAGCACACAGGCCTCTTCTTTC
TCCTCCCACTCATGTCCACTTCTCCCAGTCCCCTGCGTAAACGCAAACCCCTCGTTCTCC
CAAATCTAGATCCAGATTCTCTCTTTCTCCTCTCTT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ATGTCCAGTGTGTGCGAAAAGAGGCCCCTTTGGCAAAGAAAGTGCCTGAATGTCAGCTCT
GGGAGAAACTGCAGAATTCAAAATGTGTTTGTAAAATGCCCTATGAATGCGGATCTTCCT
TAGACGTGTGCGCTCGAGATGAGAGAAGCAAAAGGATCCTGCGACTGACAGTTTGCAAGA
TGCATGTTCTCCAATGTCAGGGTAGAAATTACACTCTTTCTGTTGGGGAGACCTGTACTC
TGCCTGGCTCCGCTGAGAAAGCTTGCGGTGCATGTCCACTCTGGGAGAAATGTGATGCCC
AAAGCAGCAAATGTGTCTGCAGAGCCGCCTCGGAGTGCGAGGAAGCGGGGTTCCGCGTCT
GCGTGGAGGTGAACGGCAGGGAGCAGACGATGACCGAGTGTGAGGCCGGCGTCCTGAGAT
GCCTAGGACTGAGCATCACTGTCACCAGCATCAGGCCCTGCGCGCCCGAAGCCCCGTAGC
AATCCCGGCGCGCACAACCTGCCACGTAGACAGCTTCTCAGCACACAGGCCTCTTCTTTC
TCCTCCCACTCATGTCCACTTCTCCCAGTCCCCTGCGTAAACGCAAACCCCTCGTTCTCC
CAAATCTAGATCCAGATTCTCTCTTTCTCCTCTCTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
114-297, gnl|bosTau2|chr20 (20132402-20132585) |
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114-297, gnl|canFam2|chr4 (71652306-71652159) |
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114-297, gnl|dasNov1|scaffold_25594 (8393-8528) |
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114-297, gnl|echTel1|scaffold_315663 (82050-81905) |
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114-297, gnl|galGal2|chrZ (6058854-6059002) |
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114-297, gnl|hg17|chr5 (41015560-41015705) |
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114-297, gnl|Hg17|chr5 (41015585-41015768) |
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114-297, gnl|loxAfr1|scaffold_14370 (7239-7388) |
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114-297, gnl|mm7|chr15 (4815396-4815250) |
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114-297, gnl|Mm7|chr15 (4815368-4815185) |
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114-297, gnl|monDom2|scaffold_20 (30038154-30038023) |
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114-297, gnl|oryCun1|scaffold_148238 (8638-8489) |
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114-297, gnl|panTro1|chr4 (75534261-75534116) |
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114-297, gnl|rheMac2|chr6 (40835428-40835573) |
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114-297, gnl|tetNig1|chr12 (8705919-8705792) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
114-297, gnl|bosTau2|chr20 (20132402-20132585) |
|
114-297, gnl|canFam2|chr4 (71652306-71652159) |
|
114-297, gnl|dasNov1|scaffold_25594 (8393-8528) |
|
114-297, gnl|echTel1|scaffold_315663 (82050-81905) |
|
114-297, gnl|galGal2|chrZ (6058854-6059002) |
|
114-297, gnl|hg17|chr5 (41015560-41015705) |
|
114-297, gnl|Hg17|chr5 (41015585-41015768) |
|
114-297, gnl|loxAfr1|scaffold_14370 (7239-7388) |
|
114-297, gnl|mm7|chr15 (4815396-4815250) |
|
114-297, gnl|Mm7|chr15 (4815368-4815185) |
|
114-297, gnl|monDom2|scaffold_20 (30038154-30038023) |
|
114-297, gnl|oryCun1|scaffold_148238 (8638-8489) |
|
114-297, gnl|panTro1|chr4 (75534261-75534116) |
|
114-297, gnl|rheMac2|chr6 (40835428-40835573) |
|
114-297, gnl|tetNig1|chr12 (8705919-8705792) |
|
lun (0.150489) |
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cty (0.10408) |
|
lun (0.150489) |
|
cty (0.10408) |
