Non-Coding RNA Search

Ss1.1-Pig3-SRG8003N19.5

Sequence:


               
               CAACAGTGTCACTTGCTAATGGCAGCCATGTTGGACAGCGACTGTATATCTCCAATCAGG
CCTCGTTCTTCTGAAGAAAATACTGTAAACAGGAGTATGAAAGTTTCTTTGTAAAGCCTG
CAAATTAAAATACTCTTTTATTTTAGAATCGGGTTTGCACATTGGGTTTTAAAATGATAA
TTATATATTTATTTCAACATAGTAAAACATCACAATTCAGAATAACTTACACTTGTAAAA
CTTGTAAAAATGCTAAGTTTAAAAAGTTACTCAGTGATTTCTCTTGATAAAGGCATAACA
AACTACTATTCTTTTTAAACTTTCGGGATTTTAAATAACTTCTAATTCCTGAGTGGTCAG
TAGAACCTAGAAGTTTACGTTAAATTTTTTCATTATAACTTTGCTAGAGTTTCACAAACA
TTAAAGCACTTGCAGACAGTGGTTACACTAGATTTGATTACCAAGGATCACCATCTGTAT
TAGAGATTAGAACAATTCTGTAACCAGAAGCATCTAACTATTATGTAGAAAGAAATGAAG
GGCAAAAAGATTAAGATGCAAATTTTATGCAGTACTAAAGAAAAAGCAGTCTACCATTGT
CCTTGAAAATAACTATAAATATTTCAGTTGATGATTATTTGTTATAGAAATAAATTATAA
TTTTGCTGTTAATGTATTTAAGGTTTTTATAGTTATGCTTCATTTGTGTTTGATATTCAC
TGTATAGTTGTTTGAGTAATAAGTGTTAGAGTTTTTTAATGTTGAAATCATGTGTTGTTT
AATTTTTGTACTTGAATTCAAATTCTTGGACATTAAATATGCGATGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACAGTGTCACTTGCTAATGGCAGCCATGTTGGACAGCGACTGTATATCTCCAATCAGG
CCTCGTTCTTCTGAAGAAAATACTGTAAACAGGAGTATGAAAGTTTCTTTGTAAAGCCTG
CAAATTAAAATACTCTTTTATTTTAGAATCGGGTTTGCACATTGGGTTTTAAAATGATAA
TTATATATTTATTTCAACATAGTAAAACATCACAATTCAGAATAACTTACACTTGTAAAA
CTTGTAAAAATGCTAAGTTTAAAAAGTTACTCAGTGATTTCTCTTGATAAAGGCATAACA
AACTACTATTCTTTTTAAACTTTCGGGATTTTAAATAACTTCTAATTCCTGAGTGGTCAG
TAGAACCTAGAAGTTTACGTTAAATTTTTTCATTATAACTTTGCTAGAGTTTCACAAACA
TTAAAGCACTTGCAGACAGTGGTTACACTAGATTTGATTACCAAGGATCACCATCTGTAT
TAGAGATTAGAACAATTCTGTAACCAGAAGCATCTAACTATTATGTAGAAAGAAATGAAG
GGCAAAAAGATTAAGATGCAAATTTTATGCAGTACTAAAGAAAAAGCAGTCTACCATTGT
CCTTGAAAATAACTATAAATATTTCAGTTGATGATTATTTGTTATAGAAATAAATTATAA
TTTTGCTGTTAATGTATTTAAGGTTTTTATAGTTATGCTTCATTTGTGTTTGATATTCAC
TGTATAGTTGTTTGAGTAATAAGTGTTAGAGTTTTTTAATGTTGAAATCATGTGTTGTTT
AATTTTTGTACTTGAATTCAAATTCTTGGACATTAAATATGCGATGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-820, gnl|bosTau2|chr17 (165347-164542)
               

               
               1-820, gnl|Hg17|chr4 (156106751-156107558)
               

               
               1-820, gnl|Mm7|chr3 (82942200-82941428)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-820, gnl|bosTau2|chr17 (165347-164542)
               

               
               1-820, gnl|Hg17|chr4 (156106751-156107558)
               

               
               1-820, gnl|Mm7|chr3 (82942200-82941428)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ese (0.126502)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)

	1-820, gnl\|bosTau2\|chr17 (165347-164542)
	1-820, gnl\|Hg17\|chr4 (156106751-156107558)
	1-820, gnl\|Mm7\|chr3 (82942200-82941428)