Ss1.1-Pig3-SRG8003O21.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGAGAGATGGGCCAGAAAGCGTTTCAGCAGAGGCTGAAGGAGATCCAAATGAGTGAATA TGATGCTGAGACCTACGAAACGTTTTCAGGGGCTGTTCGACGGCAGGTGCACTCCCTCCG AATTATCCTGGATAATTTACAGGCTAAAGGTAAAGAAAGGCAGTGTCACTTAAGGGACCT AAAGGGAACCCCCTCCTTTTCTTCTCACAACTCCAACCCTCCCGTTAACACAGTATGTTG TAATCCATTTTAGTCACGGAACCCAGCAGCTGTGTCTACTGCTGTCCTGTGAGTTCCGAG TCTAGTCCTGTTATGATCATAGTCGTGGGCATCATGCAAATCTCATTTCCTATCCAGCTT GTCAGAATGTGAGATCACATTTGTATTATGAGAAATCTCTGTAAAAGAAACACCCAAATG TGGTTTGGGCTGAGGGGAGGACAACAGATTAGACTAAATAAGGTGAGTGATTTTTCAGTT TGAGTGAGTTTGAAAAATCAAATTAAAAGAATCTATACATGTATGTGTAACTGGGTCACC ATGCTGTACAGTAGAAAATTGACAGAACACTGTAAACCAGCTATAATGAAAAAAACAAAA ATCATTATATAAAATAAATAAATAAATACTTAGCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGAGAGATGGGCCAGAAAGCGTTTCAGCAGAGGCTGAAGGAGATCCAAATGAGTGAATA TGATGCTGAGACCTACGAAACGTTTTCAGGGGCTGTTCGACGGCAGGTGCACTCCCTCCG AATTATCCTGGATAATTTACAGGCTAAAGGTAAAGAAAGGCAGTGTCACTTAAGGGACCT AAAGGGAACCCCCTCCTTTTCTTCTCACAACTCCAACCCTCCCGTTAACACAGTATGTTG TAATCCATTTTAGTCACGGAACCCAGCAGCTGTGTCTACTGCTGTCCTGTGAGTTCCGAG TCTAGTCCTGTTATGATCATAGTCGTGGGCATCATGCAAATCTCATTTCCTATCCAGCTT GTCAGAATGTGAGATCACATTTGTATTATGAGAAATCTCTGTAAAAGAAACACCCAAATG TGGTTTGGGCTGAGGGGAGGACAACAGATTAGACTAAATAAGGTGAGTGATTTTTCAGTT TGAGTGAGTTTGAAAAATCAAATTAAAAGAATCTATACATGTATGTGTAACTGGGTCACC ATGCTGTACAGTAGAAAATTGACAGAACACTGTAAACCAGCTATAATGAAAAAAACAAAA ATCATTATATAAAATAAATAAATAAATACTTAGCCT |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 32-143, gnl|bosTau2|chr12 (4887335-4887224) | |
| 32-143, gnl|canFam2|chr22 (12057761-12057611) | |
| 32-143, gnl|danRer3|chrUn (178524397-178524279) | |
| 32-143, gnl|dasNov1|scaffold_9875 (45076-45215) | |
| 32-143, gnl|echTel1|scaffold_212569 (140-290) | |
| 32-143, gnl|fr1|chrUn (223792187-223792309) | |
| 32-143, gnl|galGal2|chr1 (158187290-158187436) | |
| 32-143, gnl|hg17|chr13 (41077269-41077419) | |
| 32-143, gnl|Hg17|chr13 (41077414-41077303) | |
| 32-143, gnl|loxAfr1|scaffold_28313 (22995-23145) | |
| 32-143, gnl|mm7|chr14 (73844936-73844788) | |
| 32-143, gnl|Mm7|chr14 (73844791-73844902) | |
| 32-143, gnl|monDom2|scaffold_64 (3192577-3192729) | |
| 32-143, gnl|oryCun1|scaffold_212683 (1990-2131) | |
| 32-143, gnl|panTro1|chr14 (40755805-40755955) | |
| 32-143, gnl|rheMac2|chr17 (20552924-20553074) | |
| 32-143, gnl|rn3|chr15 (60356222-60356076) | |
| 32-143, gnl|tetNig1|chr2 (6560013-6560136) | |
| 32-143, gnl|xenTro1|scaffold_381 (428090-428212) | |
| 179-508, gnl|bosTau2|chr9 (12884264-12883922) | |
| 179-508, gnl|Hg17|chr6 (126226066-126226426) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 32-143, gnl|bosTau2|chr12 (4887335-4887224) | |
| 32-143, gnl|canFam2|chr22 (12057761-12057611) | |
| 32-143, gnl|danRer3|chrUn (178524397-178524279) | |
| 32-143, gnl|dasNov1|scaffold_9875 (45076-45215) | |
| 32-143, gnl|echTel1|scaffold_212569 (140-290) | |
| 32-143, gnl|fr1|chrUn (223792187-223792309) | |
| 32-143, gnl|galGal2|chr1 (158187290-158187436) | |
| 32-143, gnl|hg17|chr13 (41077269-41077419) | |
| 32-143, gnl|Hg17|chr13 (41077414-41077303) | |
| 32-143, gnl|loxAfr1|scaffold_28313 (22995-23145) | |
| 32-143, gnl|mm7|chr14 (73844936-73844788) | |
| 32-143, gnl|Mm7|chr14 (73844791-73844902) | |
| 32-143, gnl|monDom2|scaffold_64 (3192577-3192729) | |
| 32-143, gnl|oryCun1|scaffold_212683 (1990-2131) | |
| 32-143, gnl|panTro1|chr14 (40755805-40755955) | |
| 32-143, gnl|rheMac2|chr17 (20552924-20553074) | |
| 32-143, gnl|rn3|chr15 (60356222-60356076) | |
| 32-143, gnl|tetNig1|chr2 (6560013-6560136) | |
| 32-143, gnl|xenTro1|scaffold_381 (428090-428212) | |
| 179-508, gnl|bosTau2|chr9 (12884264-12883922) | |
| 179-508, gnl|Hg17|chr6 (126226066-126226426) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| mgp (0.230681) | |
| lyg (0.133103) | |
| ese (0.126502) |