Ss1.1-Pig3-SRG8003P15.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTTCCTGGTTGCACTGGACGCGGCGACCGTCTGGGGCTGTTTGAACAGTTTAACTCAAA ACATGGATATCAGACCAAATCATACAATTTATATCAACAATATGAACGACAAAATTAAAA AAGAAGAATTGAAGAGATCCCTGTATGCCCTGTTTTCTCAGTTTGGCCATGTGGTAGATA TTGTGGCTTTAAAGACCATGAAGATGAGGGGGCAAGCCTTTGTTATATTTAAGGAACTGG GTTCATCCACAAATGCCTTGAGACAGTTACAAGGATTTCCATTTTATGGCAAACCGATGC GAATCCAGTATGCAAAAACAGATTCTGATATAATATCTAAAATGCGTGGTACTTTTGCTG ACAAAGAAAAGAAAAAAGAAAAGAAAAAAGCCAAAACTGTGGAGCAGACTGCAACCACCG TGAACAAGAAACCTGGTCAGGGAACACCAAATTCGGCTAATACCCAAGGAAATGCAACAC CAAATCCTCAGGTCCCTGATTATCCTCCAAACTATATTTTATTCCTTAATAATTTACCGG AAGAGACTAATGAGATGATGCTATCCATGCTGTTTAATCAGTTCCCTGGTTTCAAGGAAG TACGTTTGGTACCTGGGAGGCATGACATTGCTTTTGTTGAATTTGAAAACGATGGACAGG CTGGAGCTGCCAGGGATGCTTTACAGGGCTTTAAGATCACACCATCCCATGCCATGAAGA TCACTTATGCCAAAAAATAACATTTGGGATAGTTGTCTTTAAAGGACTTGGTATTTATGG TGTTTGTTTTGATAATGTTTGGTCAGGCCATTTTATTGGGGGGAGTGGGGATGTGTATGT GAAATTTTTGTAAAGGATTTAAAAAATTACCTAGTCTTTGGTTAGCCTCAGTGAACTGTG AACTGCAAAGGCCTTAATTTTGCCCAATAAACATTTATTTGTATTTTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTTCCTGGTTGCACTGGACGCGGCGACCGTCTGGGGCTGTTTGAACAGTTTAACTCAAA ACATGGATATCAGACCAAATCATACAATTTATATCAACAATATGAACGACAAAATTAAAA AAGAAGAATTGAAGAGATCCCTGTATGCCCTGTTTTCTCAGTTTGGCCATGTGGTAGATA TTGTGGCTTTAAAGACCATGAAGATGAGGGGGCAAGCCTTTGTTATATTTAAGGAACTGG GTTCATCCACAAATGCCTTGAGACAGTTACAAGGATTTCCATTTTATGGCAAACCGATGC GAATCCAGTATGCAAAAACAGATTCTGATATAATATCTAAAATGCGTGGTACTTTTGCTG ACAAAGAAAAGAAAAAAGAAAAGAAAAAAGCCAAAACTGTGGAGCAGACTGCAACCACCG TGAACAAGAAACCTGGTCAGGGAACACCAAATTCGGCTAATACCCAAGGAAATGCAACAC CAAATCCTCAGGTCCCTGATTATCCTCCAAACTATATTTTATTCCTTAATAATTTACCGG AAGAGACTAATGAGATGATGCTATCCATGCTGTTTAATCAGTTCCCTGGTTTCAAGGAAG TACGTTTGGTACCTGGGAGGCATGACATTGCTTTTGTTGAATTTGAAAACGATGGACAGG CTGGAGCTGCCAGGGATGCTTTACAGGGCTTTAAGATCACACCATCCCATGCCATGAAGA TCACTTATGCCAAAAAATAACATTTGGGATAGTTGTCTTTAAAGGACTTGGTATTTATGG TGTTTGTTTTGATAATGTTTGGTCAGGCCATTTTATTGGGGGGAGTGGGGATGTGTATGT GAAATTTTTGTAAAGGATTTAAAAAATTACCTAGTCTTTGGTTAGCCTCAGTGAACTGTG AACTGCAAAGGCCTTAATTTTGCCCAATAAACATTTATTTGTATTTTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 36-948, gnl|bosTau2|chr2 (78768041-78768935) | |
| 36-948, gnl|Hg17|chr6 (149475540-149474631) | |
| 36-948, gnl|Mm7|chr9 (31337101-31336218) | |
| 125-299, gnl|bosTau2|chr13 (4992392-4992218) | |
| 125-299, gnl|canFam2|chr24 (9113608-9113403) | |
| 125-299, gnl|danRer3|chr10 (29738441-29738650) | |
| 125-299, gnl|dasNov1|scaffold_2389 (59269-59484) | |
| 125-299, gnl|echTel1|scaffold_300682 (6223-6427) | |
| 125-299, gnl|fr1|chrUn (183712949-183712746) | |
| 125-299, gnl|galGal2|chr3 (5465423-5465624) | |
| 125-299, gnl|hg17|chr20 (16660783-16660986) | |
| 125-299, gnl|Hg17|chr20 (16660807-16660981) | |
| 125-299, gnl|loxAfr1|scaffold_185690 (809-603) | |
| 125-299, gnl|mm7|chr2 (142806008-142806210) | |
| 125-299, gnl|Mm7|chr2 (142806031-142806205) | |
| 125-299, gnl|monDom2|scaffold_1 (50987058-50987262) | |
| 125-299, gnl|oryCun1|scaffold_206507 (377968-377766) | |
| 125-299, gnl|panTro1|chr21 (16510890-16511093) | |
| 125-299, gnl|rheMac2|chr10 (50068180-50068383) | |
| 125-299, gnl|rn3|chr3 (131324491-131324693) | |
| 125-299, gnl|tetNig1|chrUn_random (84194369-84194191) | |
| 125-299, gnl|xenTro1|scaffold_112 (1816731-1816528) | |
| 581-944, gnl|bosTau2|chr13 (4958083-4958442) | |
| 581-944, gnl|Hg17|chr20 (16669491-16669857) | |
| 581-944, gnl|Mm7|chr2 (142812253-142812598) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 36-948, gnl|bosTau2|chr2 (78768041-78768935) | |
| 36-948, gnl|Hg17|chr6 (149475540-149474631) | |
| 36-948, gnl|Mm7|chr9 (31337101-31336218) | |
| 125-299, gnl|bosTau2|chr13 (4992392-4992218) | |
| 125-299, gnl|canFam2|chr24 (9113608-9113403) | |
| 125-299, gnl|danRer3|chr10 (29738441-29738650) | |
| 125-299, gnl|dasNov1|scaffold_2389 (59269-59484) | |
| 125-299, gnl|echTel1|scaffold_300682 (6223-6427) | |
| 125-299, gnl|fr1|chrUn (183712949-183712746) | |
| 125-299, gnl|galGal2|chr3 (5465423-5465624) | |
| 125-299, gnl|hg17|chr20 (16660783-16660986) | |
| 125-299, gnl|Hg17|chr20 (16660807-16660981) | |
| 125-299, gnl|loxAfr1|scaffold_185690 (809-603) | |
| 125-299, gnl|mm7|chr2 (142806008-142806210) | |
| 125-299, gnl|Mm7|chr2 (142806031-142806205) | |
| 125-299, gnl|monDom2|scaffold_1 (50987058-50987262) | |
| 125-299, gnl|oryCun1|scaffold_206507 (377968-377766) | |
| 125-299, gnl|panTro1|chr21 (16510890-16511093) | |
| 125-299, gnl|rheMac2|chr10 (50068180-50068383) | |
| 125-299, gnl|rn3|chr3 (131324491-131324693) | |
| 125-299, gnl|tetNig1|chrUn_random (84194369-84194191) | |
| 125-299, gnl|xenTro1|scaffold_112 (1816731-1816528) | |
| 581-944, gnl|bosTau2|chr13 (4958083-4958442) | |
| 581-944, gnl|Hg17|chr20 (16669491-16669857) | |
| 581-944, gnl|Mm7|chr2 (142812253-142812598) |
| Expressed library(ies): 19 entry(ies) | More info |
| Expressed library(ies): 19 entry(ies) | Help | Less info |
| vin (0.332557) | |
| spl (0.286369) | |
| csk (0.281492) | |
| ece (0.229305) | |
| tes (0.207814) | |
| ton (0.1755) | |
| eye (0.170503) | |
| nje (0.16592) | |
| fco (0.157208) | |
| fat (0.147427) | |
| liv (0.146284) | |
| lin (0.145603) | |
| ste (0.135208) | |
| thg (0.126791) | |
| ese (0.126502) | |
| tra (0.123092) | |
| med (0.116252) | |
| jej (0.0989218) | |
| ldo (0.0970026) |
| Expressed library(ies): 19 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| vin (0.332557) | |
| spl (0.286369) | |
| csk (0.281492) | |
| ece (0.229305) | |
| tes (0.207814) | |
| ton (0.1755) | |
| eye (0.170503) | |
| nje (0.16592) | |
| fco (0.157208) | |
| fat (0.147427) | |
| liv (0.146284) | |
| lin (0.145603) | |
| ste (0.135208) | |
| thg (0.126791) | |
| ese (0.126502) | |
| tra (0.123092) | |
| med (0.116252) | |
| jej (0.0989218) | |
| ldo (0.0970026) |