Non-Coding RNA Search

Ss1.1-Pig3-SRG8005B03.5

Sequence:


               
               ACCCTTCCCCTTAGGACGGCGATAAGGGTCAGGTCAGGTCGTACTGCTTTTCGTGCGCCG
TTTCCTCTCCCCCCCCCTTGCTGGAGAAGCAGCTTTTCTCGCCGGGGTCGTTGGCCCGCG
CACGGGCCGAATTTCACAGCAGCTGCGAGGACCCCGGGCTGGGCCTTTCTCCATCCCGGG
ACACAGATTCACCGAAGAAGAGCCGCAGCCTTTCTTCCCCCAAACGCAAGCCCTGCAGCG
AAAGAAAAGAAGCGAGGCGTGCTTGCAGACACTTAACCTTACTCGATTTGATTTACTTGG
GGGAAGGGGAGAGCGGTCAGTTAGATGCCCGGCTCTGCTTGGCGAACGCTTCTTTTGTTC
CCGAAACTCGAGAAAAGCCAGACCTCTACTACTGGGCACTTTAAACCGCCCTTGAATCTG
TGACGAAATTGTATTGCCAAATACTGCACTTGCTTTTTACCCTAAGGAATGTCGGAGCAT
TTTTAAATTATTTCATTTAGTTAGTTTTTCGGGGGCTCAAGTGCATTTCTGTTGAGAGCC
GTCTCTCGGTTGGCTCCCTCCACCCGTAAGTATCTTACCTTGACTTAAACCAAATGCTGA
ACCATAAAACGAAATGATTTAGGAATGCCTTAATGGGCAACATAGGATAACTGAGATAGG
TGCACTCTAGCTTTTAATCTTAGGGGAAGCCGGAAACTCTAATCAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCTTCCCCTTAGGACGGCGATAAGGGTCAGGTCAGGTCGTACTGCTTTTCGTGCGCCG
TTTCCTCTCCCCCCCCCTTGCTGGAGAAGCAGCTTTTCTCGCCGGGGTCGTTGGCCCGCG
CACGGGCCGAATTTCACAGCAGCTGCGAGGACCCCGGGCTGGGCCTTTCTCCATCCCGGG
ACACAGATTCACCGAAGAAGAGCCGCAGCCTTTCTTCCCCCAAACGCAAGCCCTGCAGCG
AAAGAAAAGAAGCGAGGCGTGCTTGCAGACACTTAACCTTACTCGATTTGATTTACTTGG
GGGAAGGGGAGAGCGGTCAGTTAGATGCCCGGCTCTGCTTGGCGAACGCTTCTTTTGTTC
CCGAAACTCGAGAAAAGCCAGACCTCTACTACTGGGCACTTTAAACCGCCCTTGAATCTG
TGACGAAATTGTATTGCCAAATACTGCACTTGCTTTTTACCCTAAGGAATGTCGGAGCAT
TTTTAAATTATTTCATTTAGTTAGTTTTTCGGGGGCTCAAGTGCATTTCTGTTGAGAGCC
GTCTCTCGGTTGGCTCCCTCCACCCGTAAGTATCTTACCTTGACTTAAACCAAATGCTGA
ACCATAAAACGAAATGATTTAGGAATGCCTTAATGGGCAACATAGGATAACTGAGATAGG
TGCACTCTAGCTTTTAATCTTAGGGGAAGCCGGAAACTCTAATCAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-691, gnl|bosTau2|chr5 (39051486-39050817)
               

               
               8-691, gnl|Hg17|chr12 (97411643-97410996)
               

               
               8-691, gnl|Mm7|chr10 (90730570-90731216)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-691, gnl|bosTau2|chr5 (39051486-39050817)
               

               
               8-691, gnl|Hg17|chr12 (97411643-97410996)
               

               
               8-691, gnl|Mm7|chr10 (90730570-90731216)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fli (0.202881)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)

	8-691, gnl\|bosTau2\|chr5 (39051486-39050817)
	8-691, gnl\|Hg17\|chr12 (97411643-97410996)
	8-691, gnl\|Mm7\|chr10 (90730570-90731216)