Non-Coding RNA Search

Ss1.1-Pig3-SRG8005E11.5

Sequence:


               
               GTTTTTGGGAGATAAGGATACAGCAAAGAACAAATTAAATTGTTAATATATTACTTCAGA
GTATTTTAAAAATCATGTTAAACCATTTTAATTTAAGACTATTGTATAGTTTTAGATTAA
AAACAAAAGTCCAGTTGAAAGATTTTAAATGTATAGCTTTTATCCTTGGTAGAGTACTTT
TGATCTGCAGGTATATATTCAACAAAAGCATTCTCTATTATAGAAAAGCTGAATTGTTGG
GACATTAACTTCTTCAGAGCTCACAGTGTTTCTCACACATGATGTATTTGCTCTATGTGA
ATTTTAAATTTGTGATATAATTGTTTAGTGTCATAGATGCTGAGTGTTTTTCTCATTTTT
TCAATTATTTGGCTTGCTCAAGAAAATCACATGAACAGTAGAGACGATAATAATACGGAT
CTGTTCTATATATTGAATTTTTAAAAATTTATAGCAATGACTATTTTTATAGAGATTTAA
AATTCATAAGCATTTAATTCCCACAACAAACCTGGGAGGTAGGTTTTATTCACATTTTAA
AAGTTAAATAAAACCCCTAAGGCTCAGAAAAAGCAAGTGACTTGCCTGAAATCACAATTA
ATAACCTGCTCTTTTGACTTAAACCCCAGTTACATGCTTTTATTTTATGTTATTCATTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTGGGAGATAAGGATACAGCAAAGAACAAATTAAATTGTTAATATATTACTTCAGA
GTATTTTAAAAATCATGTTAAACCATTTTAATTTAAGACTATTGTATAGTTTTAGATTAA
AAACAAAAGTCCAGTTGAAAGATTTTAAATGTATAGCTTTTATCCTTGGTAGAGTACTTT
TGATCTGCAGGTATATATTCAACAAAAGCATTCTCTATTATAGAAAAGCTGAATTGTTGG
GACATTAACTTCTTCAGAGCTCACAGTGTTTCTCACACATGATGTATTTGCTCTATGTGA
ATTTTAAATTTGTGATATAATTGTTTAGTGTCATAGATGCTGAGTGTTTTTCTCATTTTT
TCAATTATTTGGCTTGCTCAAGAAAATCACATGAACAGTAGAGACGATAATAATACGGAT
CTGTTCTATATATTGAATTTTTAAAAATTTATAGCAATGACTATTTTTATAGAGATTTAA
AATTCATAAGCATTTAATTCCCACAACAAACCTGGGAGGTAGGTTTTATTCACATTTTAA
AAGTTAAATAAAACCCCTAAGGCTCAGAAAAAGCAAGTGACTTGCCTGAAATCACAATTA
ATAACCTGCTCTTTTGACTTAAACCCCAGTTACATGCTTTTATTTTATGTTATTCATTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-660, gnl|bosTau2|chr3 (12570013-12570693)
               

               
               3-660, gnl|Hg17|chr12 (98932370-98931419)
               

               
               3-660, gnl|Mm7|chr10 (89378237-89378905)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-660, gnl|bosTau2|chr3 (12570013-12570693)
               

               
               3-660, gnl|Hg17|chr12 (98932370-98931419)
               

               
               3-660, gnl|Mm7|chr10 (89378237-89378905)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	3-660, gnl\|bosTau2\|chr3 (12570013-12570693)
	3-660, gnl\|Hg17\|chr12 (98932370-98931419)
	3-660, gnl\|Mm7\|chr10 (89378237-89378905)