Non-Coding RNA Search

Ss1.1-Pig3-SRG8005J14.5

Sequence:


               
               AGACACGAGGTTGAGGGGTGGAGAATAATCTTAACCACAGTTAATAGTCAAACCTACAGG
AAGATCTAGATCTAAAACCTGCCCTGCATCAAAACTTAGAGGTAAAGTATAAAGAAATAG
CTTAGATGTAGGAAAACATAAAACATTTTCATGGCTTACTCCAGAGAGCAAATATTTGCC
AGTAAGAGCTAAATAAACATCTCTGGGCACCACATGCAAGTGGGTCTCAAAAACTTCAAA
TACTCAAGTACGGGTCTGTAGTTAATGTTCTATTCATGTAAATAGAGCCAAAACATGACG
TTTCAGCATGTGATTCTGGAAAGAAACAAAGAACTGCCATGGTTGGAAGAGAAGCATGTT
CAGTGGCACTGTCATCACAATTATTTTTATTTTTTATTTAGCCAACAAACTTTCCGGTAA
ATTTTCAGTTTATTGCCTGCTCTCTTACCTTGGAATTATACATTCAGTGGTATCAATTGG
GTGCATGATTGCATGGCCATCCCTAGGTAAATATTTGTTTAATTAGCATGTTGAGTAGAG
ACTCAAAGGCCTCTTAGCAACACTAGTCGATGTCATGAAGTTTTGCACCTGTCACTCTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACACGAGGTTGAGGGGTGGAGAATAATCTTAACCACAGTTAATAGTCAAACCTACAGG
AAGATCTAGATCTAAAACCTGCCCTGCATCAAAACTTAGAGGTAAAGTATAAAGAAATAG
CTTAGATGTAGGAAAACATAAAACATTTTCATGGCTTACTCCAGAGAGCAAATATTTGCC
AGTAAGAGCTAAATAAACATCTCTGGGCACCACATGCAAGTGGGTCTCAAAAACTTCAAA
TACTCAAGTACGGGTCTGTAGTTAATGTTCTATTCATGTAAATAGAGCCAAAACATGACG
TTTCAGCATGTGATTCTGGAAAGAAACAAAGAACTGCCATGGTTGGAAGAGAAGCATGTT
CAGTGGCACTGTCATCACAATTATTTTTATTTTTTATTTAGCCAACAAACTTTCCGGTAA
ATTTTCAGTTTATTGCCTGCTCTCTTACCTTGGAATTATACATTCAGTGGTATCAATTGG
GTGCATGATTGCATGGCCATCCCTAGGTAAATATTTGTTTAATTAGCATGTTGAGTAGAG
ACTCAAAGGCCTCTTAGCAACACTAGTCGATGTCATGAAGTTTTGCACCTGTCACTCTTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-600, gnl|bosTau2|chr1 (101171965-101171379)
               

               
               1-600, gnl|Hg17|chr3 (18370873-18370294)
               

               
               1-600, gnl|Mm7|chr17 (49895300-49894777)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-600, gnl|bosTau2|chr1 (101171965-101171379)
               

               
               1-600, gnl|Hg17|chr3 (18370873-18370294)
               

               
               1-600, gnl|Mm7|chr17 (49895300-49894777)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	1-600, gnl\|bosTau2\|chr1 (101171965-101171379)
	1-600, gnl\|Hg17\|chr3 (18370873-18370294)
	1-600, gnl\|Mm7\|chr17 (49895300-49894777)