Non-Coding RNA Search

Ss1.1-Pig3-SRG8006D20.3

Sequence:


               
               GCACCAGCTGGGCTCCCGGCTGGCGGGGGCCATAGTAGTGAAGGCACATCTGTATCCAAG
AGGATTCAGTGTGATTCCTTCCCTAGCACAAGACAAAGGTCAGGAAATATCTGTAATTAG
TGTTATTTAATAGTCATTTTGTCCTTACCTTTAAGAATTTTTGTTTGGAGAGCTTGTTAA
CATAATGTAGCCTAATACTGTACTTTGAAGAAGAAAATGCAAAGTAAAATCATATGTAGC
TCAAGGCCATGACGTTCGTAAGACTGTCCCCTGACCGTTGTTGGAATCACCAAGTGCCTT
GCTGACAGAGGAGCTCACTATCCGCCTTACAGCCCAGTGTGTATAGTTCACATCCCATTT
TGTGGGACATTCTCAAAGGGGTGGCCTTGTTGAGTCTTGTGTTTCATTTCCTCACAATGC
TTTGGTGTATGTATGGGTTCGTTGAGGGAGGGTGAATGAGCAAATAAATATCATTTATTT
TCAACTTGGTATTTTATCATTTTGCAAAATCTATCTGAAGTAGATAATCTACCATATTTA
TATGAGAGACCCTACTTTTTCACCTTGTGATGACGTAGTTTTGACAGTTTTAATAAAGTT
TTCCCAATAAATGCATTATAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCAGCTGGGCTCCCGGCTGGCGGGGGCCATAGTAGTGAAGGCACATCTGTATCCAAG
AGGATTCAGTGTGATTCCTTCCCTAGCACAAGACAAAGGTCAGGAAATATCTGTAATTAG
TGTTATTTAATAGTCATTTTGTCCTTACCTTTAAGAATTTTTGTTTGGAGAGCTTGTTAA
CATAATGTAGCCTAATACTGTACTTTGAAGAAGAAAATGCAAAGTAAAATCATATGTAGC
TCAAGGCCATGACGTTCGTAAGACTGTCCCCTGACCGTTGTTGGAATCACCAAGTGCCTT
GCTGACAGAGGAGCTCACTATCCGCCTTACAGCCCAGTGTGTATAGTTCACATCCCATTT
TGTGGGACATTCTCAAAGGGGTGGCCTTGTTGAGTCTTGTGTTTCATTTCCTCACAATGC
TTTGGTGTATGTATGGGTTCGTTGAGGGAGGGTGAATGAGCAAATAAATATCATTTATTT
TCAACTTGGTATTTTATCATTTTGCAAAATCTATCTGAAGTAGATAATCTACCATATTTA
TATGAGAGACCCTACTTTTTCACCTTGTGATGACGTAGTTTTGACAGTTTTAATAAAGTT
TTCCCAATAAATGCATTATAAATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-524, gnl|bosTau2|chr18 (30072670-30072159)
               

               
               4-524, gnl|Hg17|chr19 (35007653-35009873)
               

               
               4-524, gnl|Mm7|chr7 (34990419-34989843)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-524, gnl|bosTau2|chr18 (30072670-30072159)
               

               
               4-524, gnl|Hg17|chr19 (35007653-35009873)
               

               
               4-524, gnl|Mm7|chr7 (34990419-34989843)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lin (0.145603)
               

               
               spl (0.143184)
               

               
               nbm (0.0993246)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               spl (0.143184)
               

               
               nbm (0.0993246)

	4-524, gnl\|bosTau2\|chr18 (30072670-30072159)
	4-524, gnl\|Hg17\|chr19 (35007653-35009873)
	4-524, gnl\|Mm7\|chr7 (34990419-34989843)