Ss1.1-Pig3-SRG8006D21.3
|
GAAGCAGGCCCGATGGCACCCTGATTGGGGTTTCCCCCCAGAGCTGAGAGTAAAGGTCCT
CCGTTGGAGCCGGGCTGTGGAGCTCCACCGCAGCACCCTGGCAGCCTCCGGCCGTGCCAG
TCTCCTTTTAGGCCCAATAATTAAAAGTACAGGATTTGGTTGATAAAAACGTCAACTCAG
AGGGGTTGGTTTGGAATGGCTTTTCTAGGAACCTTGTCAAGAAGATGAGGAACTTAATGG
AAGACTAGTTTCTTGTTTGAAAGAAGATCTAAGTATAAAATGCCAGGCATTTAAAAAGAG
GGTCTGTTTTAAGCCATGAAACATTTGTGTGGATCACTTTGCAGCAGCTTTGCTCCAGAG
AAAATTCAGCCTTCATTCTCAGCTGTTGCAGGTTAGAGCTTGTGTCGTGATCCAAAAAAA
GGAACAAAAGCTTTTGAAGAAAGCTTTCATTTGCTCATCATTCCAGTGTCAAGCTTAAAG
GCTTAGAAGCAGAGAAAGGGACTTCGGAGATGACATCCAAGTCTCTCTACCCACGAGAAG
AGAGTCCCAAAGATAGGTATTGACCGCACTTCTGAACCCAGACTAGTCCCAATTACTAGT
CAGGTCCCTGCCTGTCCCGCTACTGTGGGAGTTCATGGTGGCCTTGTGGATTCGGATAGG
ACAACAGGCTCAACTCAGCTGAATCACGGGAGATTTAAATCAAGGCTGCCTTTCACACAG
TCGTCCGCAGACCGTGACCTGGGTGGATTACGTGTTATGCTGGACTCTTCAGTGAGATTA
ATGTTTTAAGAAAAGGCACTTACTTGAAAATTATAAGAATGCTGACCACGCAGCAGGCAC
AGAAGTATTTACTGCATCCGGCTGTCCATGAGGCAGCTGATAACTTCAAGTGCAAGAGCT
GGGATTCACTGAATACCAGTAAGATGCCTGTGTGGGTTGGGCAGCTAATGGGAACCCAGT
AAATGATTTGAAATTGTGAATGTATCTGCATAAGATATATAAAAGCATCTTTTATTGTTT
TTAAATATAAGGATAAAAGAAATTTTTCTAATCACC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAAGCAGGCCCGATGGCACCCTGATTGGGGTTTCCCCCCAGAGCTGAGAGTAAAGGTCCT
CCGTTGGAGCCGGGCTGTGGAGCTCCACCGCAGCACCCTGGCAGCCTCCGGCCGTGCCAG
TCTCCTTTTAGGCCCAATAATTAAAAGTACAGGATTTGGTTGATAAAAACGTCAACTCAG
AGGGGTTGGTTTGGAATGGCTTTTCTAGGAACCTTGTCAAGAAGATGAGGAACTTAATGG
AAGACTAGTTTCTTGTTTGAAAGAAGATCTAAGTATAAAATGCCAGGCATTTAAAAAGAG
GGTCTGTTTTAAGCCATGAAACATTTGTGTGGATCACTTTGCAGCAGCTTTGCTCCAGAG
AAAATTCAGCCTTCATTCTCAGCTGTTGCAGGTTAGAGCTTGTGTCGTGATCCAAAAAAA
GGAACAAAAGCTTTTGAAGAAAGCTTTCATTTGCTCATCATTCCAGTGTCAAGCTTAAAG
GCTTAGAAGCAGAGAAAGGGACTTCGGAGATGACATCCAAGTCTCTCTACCCACGAGAAG
AGAGTCCCAAAGATAGGTATTGACCGCACTTCTGAACCCAGACTAGTCCCAATTACTAGT
CAGGTCCCTGCCTGTCCCGCTACTGTGGGAGTTCATGGTGGCCTTGTGGATTCGGATAGG
ACAACAGGCTCAACTCAGCTGAATCACGGGAGATTTAAATCAAGGCTGCCTTTCACACAG
TCGTCCGCAGACCGTGACCTGGGTGGATTACGTGTTATGCTGGACTCTTCAGTGAGATTA
ATGTTTTAAGAAAAGGCACTTACTTGAAAATTATAAGAATGCTGACCACGCAGCAGGCAC
AGAAGTATTTACTGCATCCGGCTGTCCATGAGGCAGCTGATAACTTCAAGTGCAAGAGCT
GGGATTCACTGAATACCAGTAAGATGCCTGTGTGGGTTGGGCAGCTAATGGGAACCCAGT
AAATGATTTGAAATTGTGAATGTATCTGCATAAGATATATAAAAGCATCTTTTATTGTTT
TTAAATATAAGGATAAAAGAAATTTTTCTAATCACC
|
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241-629, gnl|bosTau2|chr19 (2608256-2607857) |
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241-629, gnl|Hg17|chr17 (10522681-10522282) |
| |
|
689-1044, gnl|bosTau2|chr19 (2607576-2607222) |
|
689-1044, gnl|canFam2|chr5 (37949002-37949225) |
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689-1044, gnl|dasNov1|scaffold_199 (133695-133920) |
|
689-1044, gnl|echTel1|scaffold_270105 (10170-9949) |
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689-1044, gnl|hg17|chr17 (10521542-10521749) |
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689-1044, gnl|Hg17|chr17 (10521876-10521538) |
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689-1044, gnl|loxAfr1|scaffold_7030 (65798-66042) |
|
689-1044, gnl|panTro1|chr19_random (27897572-27897364) |
|
689-1044, gnl|rheMac2|chr16 (10430585-10430809) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
241-629, gnl|bosTau2|chr19 (2608256-2607857) |
|
241-629, gnl|Hg17|chr17 (10522681-10522282) |
| |
|
689-1044, gnl|bosTau2|chr19 (2607576-2607222) |
|
689-1044, gnl|canFam2|chr5 (37949002-37949225) |
|
689-1044, gnl|dasNov1|scaffold_199 (133695-133920) |
|
689-1044, gnl|echTel1|scaffold_270105 (10170-9949) |
|
689-1044, gnl|hg17|chr17 (10521542-10521749) |
|
689-1044, gnl|Hg17|chr17 (10521876-10521538) |
|
689-1044, gnl|loxAfr1|scaffold_7030 (65798-66042) |
|
689-1044, gnl|panTro1|chr19_random (27897572-27897364) |
|
689-1044, gnl|rheMac2|chr16 (10430585-10430809) |
|
fbs (0.350693) |
|
cst (0.280073) |
|
bla (0.248694) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
ill (0.175593) |
|
lnt (0.142308) |
|
che (0.136314) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
tra (0.123092) |
|
eru (0.120048) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
fbs (0.350693) |
|
cst (0.280073) |
|
bla (0.248694) |
|
hea (0.204499) |
|
cmu (0.186393) |
|
ill (0.175593) |
|
lnt (0.142308) |
|
che (0.136314) |
|
pla (0.133672) |
|
lyg (0.133103) |
|
ret (0.128733) |
|
tra (0.123092) |
|
eru (0.120048) |
|
jej (0.0989218) |
|
eje (0.0988338) |
