Non-Coding RNA Search

Ss1.1-Pig3-SRG8006E14.3

Sequence:


               
               CAGAGCCGGAATGCCACTCAGCTGGTACAGGTGCCTCATAGTTCTGAGAAGGGGGCTCTT
TGGTCTAGATCTTGACCTCTAGGGACGGCTCCTGACTGGCTGGTGCTAATGTCTCTGATG
GGGTTCTGTGAATCTGGTTCTGTAAGTGTTGGAAAAGTGCAGGTGGAGTTGGCTTACTGA
GATGAATTGCCTCTGCCAGATAAAGAAACATTGCCCTTAGGGCAGATTGTGGGCAGGAAC
CTTGCTGGCCGAAATGGAAGCTATCTGGGAGTCTCTCCAGCTACTCCAGTCTTACATTCT
TTCTCTCTAGTGCCTTTGGTGGAGACTGGCTCCCCTCCTGCCCTCCTTTGACTGTTTGAT
TCATTGACTGTTAAAATGCCAACCCATACCTATTTGGGATGCAAAACTGAAGTCTTTAAA
AGGAAATAATGTAAGAAACAGATACATTTATGACAGCAACCTTCAAGATCCTTGGCATTT
GGTTTCTCAGCTTTCTACAAACTTTGATTTCACTGAAATGTTGAAACTACTCGTCTGAGG
GTAAAGGAGCCTCCTTATCACAAATGCTGTAGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAGCCGGAATGCCACTCAGCTGGTACAGGTGCCTCATAGTTCTGAGAAGGGGGCTCTT
TGGTCTAGATCTTGACCTCTAGGGACGGCTCCTGACTGGCTGGTGCTAATGTCTCTGATG
GGGTTCTGTGAATCTGGTTCTGTAAGTGTTGGAAAAGTGCAGGTGGAGTTGGCTTACTGA
GATGAATTGCCTCTGCCAGATAAAGAAACATTGCCCTTAGGGCAGATTGTGGGCAGGAAC
CTTGCTGGCCGAAATGGAAGCTATCTGGGAGTCTCTCCAGCTACTCCAGTCTTACATTCT
TTCTCTCTAGTGCCTTTGGTGGAGACTGGCTCCCCTCCTGCCCTCCTTTGACTGTTTGAT
TCATTGACTGTTAAAATGCCAACCCATACCTATTTGGGATGCAAAACTGAAGTCTTTAAA
AGGAAATAATGTAAGAAACAGATACATTTATGACAGCAACCTTCAAGATCCTTGGCATTT
GGTTTCTCAGCTTTCTACAAACTTTGATTTCACTGAAATGTTGAAACTACTCGTCTGAGG
GTAAAGGAGCCTCCTTATCACAAATGCTGTAGCTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               326-576, gnl|bosTau2|chr2 (57886762-57887011)
               

               
               326-576, gnl|Hg17|chr2 (207769641-207769404)
               

               
               326-576, gnl|Mm7|chr1 (64274483-64274227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               326-576, gnl|bosTau2|chr2 (57886762-57887011)
               

               
               326-576, gnl|Hg17|chr2 (207769641-207769404)
               

               
               326-576, gnl|Mm7|chr1 (64274483-64274227)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               clu (0.239292)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               clu (0.239292)
               

               
               pgl (0.118483)

	326-576, gnl\|bosTau2\|chr2 (57886762-57887011)
	326-576, gnl\|Hg17\|chr2 (207769641-207769404)
	326-576, gnl\|Mm7\|chr1 (64274483-64274227)